Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH11P55287 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH11P55287 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDH11P55287 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.31□□□□□ -0.12
CDH11P55287 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.31□□□□□ -0.12
CDH11P55287 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.31□□□□□ -0.12
CDH11P55287 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.31□□□□□ -0.12
CDH11P55287 AC093214.1-201ENST00000511688 1107 ntBASIC14.31□□□□□ -0.12
CDH11P55287 AC069262.1-201ENST00000539058 672 ntBASIC14.31□□□□□ -0.12
CDH11P55287 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.31□□□□□ -0.12
CDH11P55287 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CDH11P55287 AC026150.2-201ENST00000564693 1156 ntBASIC14.31□□□□□ -0.12
CDH11P55287 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CDH11P55287 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CDH11P55287 AC148477.4-201ENST00000613430 1793 ntBASIC14.31□□□□□ -0.12
CDH11P55287 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.31□□□□□ -0.12
CDH11P55287 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.31□□□□□ -0.12
CDH11P55287 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH11P55287 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.31□□□□□ -0.12
CDH11P55287 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDH11P55287 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.31□□□□□ -0.12
CDH11P55287 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH11P55287 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.31□□□□□ -0.12
CDH11P55287 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH11P55287 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDH11P55287 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH11P55287 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.31□□□□□ -0.12
CDH11P55287 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CDH11P55287 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH11P55287 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH11P55287 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CDH11P55287 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.3□□□□□ -0.12
CDH11P55287 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH11P55287 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH11P55287 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CDH11P55287 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
CDH11P55287 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.3□□□□□ -0.12
CDH11P55287 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CDH11P55287 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CDH11P55287 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CDH11P55287 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CDH11P55287 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH11P55287 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
CDH11P55287 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDH11P55287 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH11P55287 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH11P55287 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.3□□□□□ -0.12
CDH11P55287 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDH11P55287 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDH11P55287 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH11P55287 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH11P55287 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDH11P55287 SPDYE14P-201ENST00000442619 822 ntBASIC14.3□□□□□ -0.12
CDH11P55287 KLF2P3-201ENST00000451977 1087 ntBASIC14.3□□□□□ -0.12
CDH11P55287 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.3□□□□□ -0.12
CDH11P55287 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.3□□□□□ -0.12
CDH11P55287 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.3□□□□□ -0.12
CDH11P55287 SPCS2P1-201ENST00000561636 679 ntBASIC14.3□□□□□ -0.12
CDH11P55287 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.3□□□□□ -0.12
CDH11P55287 MIR4313-201ENST00000580760 101 ntBASIC14.3□□□□□ -0.12
CDH11P55287 MIR3197-201ENST00000582241 73 ntBASIC14.3□□□□□ -0.12
CDH11P55287 AC005498.2-205ENST00000593218 784 ntBASIC14.3□□□□□ -0.12
CDH11P55287 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.3□□□□□ -0.12
CDH11P55287 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH11P55287 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH11P55287 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH11P55287 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.3□□□□□ -0.12
CDH11P55287 REXO1L1P-202ENST00000608646 1974 ntBASIC14.3□□□□□ -0.12
CDH11P55287 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH11P55287 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDH11P55287 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH11P55287 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.3□□□□□ -0.12
CDH11P55287 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDH11P55287 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CDH11P55287 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDH11P55287 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH11P55287 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDH11P55287 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH11P55287 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CDH11P55287 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.3□□□□□ -0.12
CDH11P55287 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
CDH11P55287 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CDH11P55287 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH11P55287 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
CDH11P55287 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CDH11P55287 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH11P55287 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
CDH11P55287 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH11P55287 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.29□□□□□ -0.12
CDH11P55287 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CDH11P55287 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH11P55287 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CDH11P55287 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH11P55287 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH11P55287 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CDH11P55287 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDH11P55287 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH11P55287 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH11P55287 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH11P55287 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms