Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 AC015910.1-201ENST00000579400 975 ntBASIC13.77□□□□□ -0.21
MSR1P21757 AC148477.4-201ENST00000613430 1793 ntBASIC13.77□□□□□ -0.21
MSR1P21757 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
MSR1P21757 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.77□□□□□ -0.21
MSR1P21757 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
MSR1P21757 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
MSR1P21757 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MSR1P21757 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
MSR1P21757 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
MSR1P21757 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
MSR1P21757 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MSR1P21757 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MSR1P21757 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MSR1P21757 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.77□□□□□ -0.21
MSR1P21757 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MSR1P21757 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
MSR1P21757 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
MSR1P21757 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
MSR1P21757 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.76□□□□□ -0.21
MSR1P21757 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MSR1P21757 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MSR1P21757 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
MSR1P21757 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
MSR1P21757 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MSR1P21757 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
MSR1P21757 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.76□□□□□ -0.21
MSR1P21757 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
MSR1P21757 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MSR1P21757 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.76□□□□□ -0.21
MSR1P21757 AC006058.4-201ENST00000624016 1670 ntBASIC13.76□□□□□ -0.21
MSR1P21757 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.76□□□□□ -0.21
MSR1P21757 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.76□□□□□ -0.21
MSR1P21757 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.76□□□□□ -0.21
MSR1P21757 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
MSR1P21757 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MSR1P21757 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
MSR1P21757 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
MSR1P21757 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
MSR1P21757 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
MSR1P21757 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
MSR1P21757 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.76□□□□□ -0.21
MSR1P21757 AL133267.1-201ENST00000398220 340 ntBASIC13.76□□□□□ -0.21
MSR1P21757 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.76□□□□□ -0.21
MSR1P21757 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.76□□□□□ -0.21
MSR1P21757 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
MSR1P21757 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
MSR1P21757 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.76□□□□□ -0.21
MSR1P21757 LINC01115-203ENST00000606068 577 ntBASIC13.76□□□□□ -0.21
MSR1P21757 AL844908.2-201ENST00000609461 460 ntBASIC13.76□□□□□ -0.21
MSR1P21757 GPALPP1-207ENST00000611650 899 ntBASIC13.76□□□□□ -0.21
MSR1P21757 AL590560.3-201ENST00000623350 461 ntBASIC13.76□□□□□ -0.21
MSR1P21757 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
MSR1P21757 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.76□□□□□ -0.21
MSR1P21757 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
MSR1P21757 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.76□□□□□ -0.21
MSR1P21757 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.76□□□□□ -0.21
MSR1P21757 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
MSR1P21757 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MSR1P21757 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
MSR1P21757 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MSR1P21757 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
MSR1P21757 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MSR1P21757 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.76□□□□□ -0.21
MSR1P21757 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.76□□□□□ -0.21
MSR1P21757 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MSR1P21757 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MSR1P21757 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
MSR1P21757 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
MSR1P21757 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.76□□□□□ -0.21
MSR1P21757 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MSR1P21757 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.76□□□□□ -0.21
MSR1P21757 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.76□□□□□ -0.21
MSR1P21757 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.76□□□□□ -0.21
MSR1P21757 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.76□□□□□ -0.21
MSR1P21757 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
MSR1P21757 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
MSR1P21757 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
MSR1P21757 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MSR1P21757 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
MSR1P21757 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
MSR1P21757 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
MSR1P21757 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MSR1P21757 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MSR1P21757 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.75□□□□□ -0.21
MSR1P21757 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
MSR1P21757 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MSR1P21757 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.75□□□□□ -0.21
MSR1P21757 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
MSR1P21757 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
MSR1P21757 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.75□□□□□ -0.21
MSR1P21757 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MSR1P21757 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MSR1P21757 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MSR1P21757 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
MSR1P21757 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MSR1P21757 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.75□□□□□ -0.21
MSR1P21757 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
MSR1P21757 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.75□□□□□ -0.21
MSR1P21757 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
MSR1P21757 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms