Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.48□□□□□ -0.09
TNFRSF1BP20333 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.48□□□□□ -0.09
TNFRSF1BP20333 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.48□□□□□ -0.09
TNFRSF1BP20333 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TNFRSF1BP20333 C20orf181-201ENST00000623918 480 ntBASIC14.48□□□□□ -0.09
TNFRSF1BP20333 AC084121.4-201ENST00000641598 221 ntBASIC14.48□□□□□ -0.09
TNFRSF1BP20333 AF228730.8-201ENST00000642140 221 ntBASIC14.48□□□□□ -0.09
TNFRSF1BP20333 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TNFRSF1BP20333 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TNFRSF1BP20333 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
TNFRSF1BP20333 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TNFRSF1BP20333 AC140479.7-201ENST00000636301 2332 ntBASIC14.48□□□□□ -0.09
TNFRSF1BP20333 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TNFRSF1BP20333 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.48□□□□□ -0.09
TNFRSF1BP20333 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TNFRSF1BP20333 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TNFRSF1BP20333 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TNFRSF1BP20333 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TNFRSF1BP20333 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TNFRSF1BP20333 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.47□□□□□ -0.09
TNFRSF1BP20333 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 ACE3P-201ENST00000423435 1973 ntBASIC14.47□□□□□ -0.09
TNFRSF1BP20333 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 FAM58DP-201ENST00000428076 619 ntBASIC14.47□□□□□ -0.09
TNFRSF1BP20333 HTR5BP-201ENST00000430851 1154 ntBASIC14.47□□□□□ -0.09
TNFRSF1BP20333 HIST3H2BA-201ENST00000436555 524 ntBASIC14.47□□□□□ -0.09
TNFRSF1BP20333 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 PGAM5P1-201ENST00000518923 814 ntBASIC14.47□□□□□ -0.09
TNFRSF1BP20333 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 AC105021.1-202ENST00000570572 669 ntBASIC14.47□□□□□ -0.09
TNFRSF1BP20333 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TNFRSF1BP20333 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.46□□□□□ -0.09
TNFRSF1BP20333 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TNFRSF1BP20333 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TNFRSF1BP20333 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TNFRSF1BP20333 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
TNFRSF1BP20333 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TNFRSF1BP20333 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TNFRSF1BP20333 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TNFRSF1BP20333 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TNFRSF1BP20333 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.46□□□□□ -0.09
TNFRSF1BP20333 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TNFRSF1BP20333 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TNFRSF1BP20333 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.46□□□□□ -0.09
TNFRSF1BP20333 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TNFRSF1BP20333 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.46□□□□□ -0.09
TNFRSF1BP20333 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.46□□□□□ -0.09
TNFRSF1BP20333 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TNFRSF1BP20333 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.46□□□□□ -0.09
TNFRSF1BP20333 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
TNFRSF1BP20333 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.46□□□□□ -0.09
TNFRSF1BP20333 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TNFRSF1BP20333 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TNFRSF1BP20333 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.46□□□□□ -0.09
TNFRSF1BP20333 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
TNFRSF1BP20333 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.46□□□□□ -0.09
TNFRSF1BP20333 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms