Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.35□□□□□ -0.11
BMP4P12644 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.35□□□□□ -0.11
BMP4P12644 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
BMP4P12644 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
BMP4P12644 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
BMP4P12644 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BMP4P12644 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
BMP4P12644 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
BMP4P12644 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.35□□□□□ -0.11
BMP4P12644 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
BMP4P12644 REXO1L1P-202ENST00000608646 1974 ntBASIC14.35□□□□□ -0.11
BMP4P12644 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
BMP4P12644 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BMP4P12644 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
BMP4P12644 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
BMP4P12644 HMGA1P7-201ENST00000406908 502 ntBASIC14.35□□□□□ -0.11
BMP4P12644 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.35□□□□□ -0.11
BMP4P12644 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
BMP4P12644 HLA-J-203ENST00000494367 1087 ntBASIC14.35□□□□□ -0.11
BMP4P12644 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
BMP4P12644 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
BMP4P12644 KRT8P23-201ENST00000560090 1207 ntBASIC14.35□□□□□ -0.11
BMP4P12644 MIR3909-201ENST00000579518 119 ntBASIC14.35□□□□□ -0.11
BMP4P12644 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.35□□□□□ -0.11
BMP4P12644 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.35□□□□□ -0.11
BMP4P12644 AL009183.1-201ENST00000603760 355 ntBASIC14.35□□□□□ -0.11
BMP4P12644 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
BMP4P12644 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
BMP4P12644 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.35□□□□□ -0.11
BMP4P12644 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
BMP4P12644 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
BMP4P12644 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BMP4P12644 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BMP4P12644 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.35□□□□□ -0.11
BMP4P12644 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
BMP4P12644 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
BMP4P12644 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BMP4P12644 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BMP4P12644 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
BMP4P12644 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BMP4P12644 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BMP4P12644 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
BMP4P12644 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BMP4P12644 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.34□□□□□ -0.11
BMP4P12644 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
BMP4P12644 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
BMP4P12644 AC136759.1-202ENST00000530858 2194 ntBASIC14.34□□□□□ -0.11
BMP4P12644 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.34□□□□□ -0.11
BMP4P12644 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BMP4P12644 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
BMP4P12644 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BMP4P12644 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.34□□□□□ -0.11
BMP4P12644 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
BMP4P12644 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BMP4P12644 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
BMP4P12644 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
BMP4P12644 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.34□□□□□ -0.11
BMP4P12644 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
BMP4P12644 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BMP4P12644 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.34□□□□□ -0.11
BMP4P12644 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.34□□□□□ -0.11
BMP4P12644 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.34□□□□□ -0.11
BMP4P12644 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
BMP4P12644 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.34□□□□□ -0.11
BMP4P12644 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
BMP4P12644 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
BMP4P12644 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
BMP4P12644 AC106028.4-201ENST00000614509 607 ntBASIC14.34□□□□□ -0.11
BMP4P12644 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.34□□□□□ -0.11
BMP4P12644 LINC00628-201ENST00000628516 1289 ntBASIC14.34□□□□□ -0.11
BMP4P12644 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BMP4P12644 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.34□□□□□ -0.11
BMP4P12644 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.34□□□□□ -0.11
BMP4P12644 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.34□□□□□ -0.11
BMP4P12644 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
BMP4P12644 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BMP4P12644 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BMP4P12644 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.34□□□□□ -0.11
BMP4P12644 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.34□□□□□ -0.11
BMP4P12644 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
BMP4P12644 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.34□□□□□ -0.11
BMP4P12644 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BMP4P12644 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
BMP4P12644 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
BMP4P12644 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
BMP4P12644 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.33□□□□□ -0.11
BMP4P12644 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
BMP4P12644 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.11
BMP4P12644 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.33□□□□□ -0.11
BMP4P12644 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
BMP4P12644 MBLAC2-202ENST00000514906 1936 ntBASIC14.33□□□□□ -0.11
BMP4P12644 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
BMP4P12644 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
BMP4P12644 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.33□□□□□ -0.12
BMP4P12644 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.33□□□□□ -0.12
BMP4P12644 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
BMP4P12644 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
BMP4P12644 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
BMP4P12644 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
BMP4P12644 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms