Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.91■□□□□ 0.46
CTDNEP1O95476 AL157414.3-201ENST00000624276 1954 ntBASIC17.91■□□□□ 0.46
CTDNEP1O95476 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTDNEP1O95476 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTDNEP1O95476 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC17.91■□□□□ 0.46
CTDNEP1O95476 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTDNEP1O95476 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTDNEP1O95476 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTDNEP1O95476 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTDNEP1O95476 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTDNEP1O95476 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.91■□□□□ 0.46
CTDNEP1O95476 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.91■□□□□ 0.46
CTDNEP1O95476 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.91■□□□□ 0.46
CTDNEP1O95476 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTDNEP1O95476 LINC00552-201ENST00000625151 2579 ntBASIC17.9■□□□□ 0.46
CTDNEP1O95476 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTDNEP1O95476 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.9■□□□□ 0.46
CTDNEP1O95476 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTDNEP1O95476 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTDNEP1O95476 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTDNEP1O95476 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTDNEP1O95476 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CTDNEP1O95476 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CTDNEP1O95476 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTDNEP1O95476 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.9■□□□□ 0.46
CTDNEP1O95476 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTDNEP1O95476 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTDNEP1O95476 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTDNEP1O95476 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC17.9■□□□□ 0.46
CTDNEP1O95476 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC17.9■□□□□ 0.46
CTDNEP1O95476 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTDNEP1O95476 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTDNEP1O95476 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.9■□□□□ 0.46
CTDNEP1O95476 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTDNEP1O95476 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.9■□□□□ 0.46
CTDNEP1O95476 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.9■□□□□ 0.46
CTDNEP1O95476 TPRX2P-201ENST00000535362 881 ntBASIC17.9■□□□□ 0.46
CTDNEP1O95476 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
CTDNEP1O95476 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.9■□□□□ 0.46
CTDNEP1O95476 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.9■□□□□ 0.46
CTDNEP1O95476 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.9■□□□□ 0.46
CTDNEP1O95476 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTDNEP1O95476 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CTDNEP1O95476 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTDNEP1O95476 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CTDNEP1O95476 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CTDNEP1O95476 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CTDNEP1O95476 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTDNEP1O95476 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.9■□□□□ 0.46
CTDNEP1O95476 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTDNEP1O95476 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTDNEP1O95476 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTDNEP1O95476 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTDNEP1O95476 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CTDNEP1O95476 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.9■□□□□ 0.46
CTDNEP1O95476 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTDNEP1O95476 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CTDNEP1O95476 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CTDNEP1O95476 AL390755.1-201ENST00000623716 2027 ntBASIC17.89■□□□□ 0.46
CTDNEP1O95476 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.89■□□□□ 0.46
CTDNEP1O95476 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CTDNEP1O95476 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC17.89■□□□□ 0.46
CTDNEP1O95476 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.46
CTDNEP1O95476 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC17.89■□□□□ 0.46
CTDNEP1O95476 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CTDNEP1O95476 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CTDNEP1O95476 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTDNEP1O95476 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.89■□□□□ 0.45
CTDNEP1O95476 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTDNEP1O95476 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTDNEP1O95476 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CTDNEP1O95476 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTDNEP1O95476 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.89■□□□□ 0.45
CTDNEP1O95476 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTDNEP1O95476 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTDNEP1O95476 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTDNEP1O95476 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC17.89■□□□□ 0.45
CTDNEP1O95476 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.89■□□□□ 0.45
CTDNEP1O95476 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.89■□□□□ 0.45
CTDNEP1O95476 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.89■□□□□ 0.45
CTDNEP1O95476 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.89■□□□□ 0.45
CTDNEP1O95476 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CTDNEP1O95476 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.89■□□□□ 0.45
CTDNEP1O95476 SPTLC1P1-201ENST00000447199 261 ntBASIC17.89■□□□□ 0.45
CTDNEP1O95476 AC026410.3-201ENST00000514280 936 ntBASIC17.89■□□□□ 0.45
CTDNEP1O95476 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CTDNEP1O95476 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.89■□□□□ 0.45
CTDNEP1O95476 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CTDNEP1O95476 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.89■□□□□ 0.45
CTDNEP1O95476 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.89■□□□□ 0.45
CTDNEP1O95476 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.89■□□□□ 0.45
CTDNEP1O95476 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.89■□□□□ 0.45
CTDNEP1O95476 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTDNEP1O95476 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTDNEP1O95476 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTDNEP1O95476 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTDNEP1O95476 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTDNEP1O95476 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CTDNEP1O95476 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.89■□□□□ 0.45
CTDNEP1O95476 USP35-204ENST00000530267 2419 ntTSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms