Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
CDRT1O95170 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDRT1O95170 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDRT1O95170 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.93□□□□□ -0.18
CDRT1O95170 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC13.93□□□□□ -0.18
CDRT1O95170 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.93□□□□□ -0.18
CDRT1O95170 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDRT1O95170 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDRT1O95170 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDRT1O95170 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.93□□□□□ -0.18
CDRT1O95170 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDRT1O95170 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDRT1O95170 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDRT1O95170 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.93□□□□□ -0.18
CDRT1O95170 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.93□□□□□ -0.18
CDRT1O95170 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.93□□□□□ -0.18
CDRT1O95170 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.93□□□□□ -0.18
CDRT1O95170 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDRT1O95170 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.93□□□□□ -0.18
CDRT1O95170 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.93□□□□□ -0.18
CDRT1O95170 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDRT1O95170 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDRT1O95170 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CDRT1O95170 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDRT1O95170 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CDRT1O95170 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CDRT1O95170 AC097359.2-201ENST00000604992 2389 ntBASIC13.93□□□□□ -0.18
CDRT1O95170 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDRT1O95170 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.93□□□□□ -0.18
CDRT1O95170 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDRT1O95170 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDRT1O95170 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDRT1O95170 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDRT1O95170 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDRT1O95170 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDRT1O95170 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CDRT1O95170 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDRT1O95170 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDRT1O95170 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDRT1O95170 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC13.92□□□□□ -0.18
CDRT1O95170 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDRT1O95170 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CDRT1O95170 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CDRT1O95170 AL589702.1-201ENST00000641229 1509 ntBASIC13.92□□□□□ -0.18
CDRT1O95170 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.92□□□□□ -0.18
CDRT1O95170 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CDRT1O95170 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDRT1O95170 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDRT1O95170 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CDRT1O95170 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CDRT1O95170 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC13.92□□□□□ -0.18
CDRT1O95170 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.92□□□□□ -0.18
CDRT1O95170 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDRT1O95170 MIR3909-201ENST00000579518 119 ntBASIC13.92□□□□□ -0.18
CDRT1O95170 AL049840.3-201ENST00000602669 611 ntBASIC13.92□□□□□ -0.18
CDRT1O95170 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CDRT1O95170 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDRT1O95170 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.92□□□□□ -0.18
CDRT1O95170 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDRT1O95170 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDRT1O95170 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDRT1O95170 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDRT1O95170 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDRT1O95170 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDRT1O95170 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDRT1O95170 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDRT1O95170 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDRT1O95170 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CDRT1O95170 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
CDRT1O95170 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDRT1O95170 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDRT1O95170 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDRT1O95170 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.91□□□□□ -0.18
CDRT1O95170 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.91□□□□□ -0.18
CDRT1O95170 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
CDRT1O95170 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CDRT1O95170 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.91□□□□□ -0.18
CDRT1O95170 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDRT1O95170 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CDRT1O95170 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDRT1O95170 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDRT1O95170 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC13.91□□□□□ -0.18
CDRT1O95170 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.91□□□□□ -0.18
CDRT1O95170 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.91□□□□□ -0.18
CDRT1O95170 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.91□□□□□ -0.18
CDRT1O95170 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.91□□□□□ -0.18
CDRT1O95170 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDRT1O95170 AC079781.3-201ENST00000449110 356 ntBASIC13.91□□□□□ -0.18
CDRT1O95170 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.91□□□□□ -0.18
CDRT1O95170 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC13.91□□□□□ -0.18
CDRT1O95170 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.91□□□□□ -0.18
CDRT1O95170 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC13.91□□□□□ -0.18
CDRT1O95170 VPS51-217ENST00000639871 243 ntTSL 5 BASIC13.91□□□□□ -0.18
CDRT1O95170 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.91□□□□□ -0.18
CDRT1O95170 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.91□□□□□ -0.18
CDRT1O95170 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.91□□□□□ -0.18
CDRT1O95170 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDRT1O95170 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDRT1O95170 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.91□□□□□ -0.18
CDRT1O95170 WASH3P-207ENST00000560956 1394 ntBASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms