Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SDCBPO00560 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SDCBPO00560 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SDCBPO00560 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.29□□□□□ -0.28
SDCBPO00560 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SDCBPO00560 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SDCBPO00560 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SDCBPO00560 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SDCBPO00560 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SDCBPO00560 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.29□□□□□ -0.28
SDCBPO00560 UXT-AS1-201ENST00000590504 1525 ntBASIC13.29□□□□□ -0.28
SDCBPO00560 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.29□□□□□ -0.28
SDCBPO00560 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.29□□□□□ -0.28
SDCBPO00560 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SDCBPO00560 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SDCBPO00560 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SDCBPO00560 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SDCBPO00560 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.29□□□□□ -0.28
SDCBPO00560 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SDCBPO00560 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
SDCBPO00560 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
SDCBPO00560 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
SDCBPO00560 AC005912.2-201ENST00000619492 2400 ntBASIC13.29□□□□□ -0.28
SDCBPO00560 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SDCBPO00560 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SDCBPO00560 AJ011931.1-201ENST00000618749 2492 ntBASIC13.29□□□□□ -0.28
SDCBPO00560 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SDCBPO00560 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SDCBPO00560 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SDCBPO00560 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
SDCBPO00560 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SDCBPO00560 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.29□□□□□ -0.28
SDCBPO00560 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SDCBPO00560 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SDCBPO00560 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SDCBPO00560 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.29□□□□□ -0.28
SDCBPO00560 SPCS2P4-201ENST00000436160 681 ntBASIC13.29□□□□□ -0.28
SDCBPO00560 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.29□□□□□ -0.28
SDCBPO00560 DNAJB3-201ENST00000446806 729 ntBASIC13.29□□□□□ -0.28
SDCBPO00560 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.29□□□□□ -0.28
SDCBPO00560 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SDCBPO00560 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.29□□□□□ -0.28
SDCBPO00560 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.29□□□□□ -0.28
SDCBPO00560 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.29□□□□□ -0.28
SDCBPO00560 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.29□□□□□ -0.28
SDCBPO00560 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.29□□□□□ -0.28
SDCBPO00560 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SDCBPO00560 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.29□□□□□ -0.28
SDCBPO00560 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SDCBPO00560 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SDCBPO00560 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
SDCBPO00560 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.29□□□□□ -0.28
SDCBPO00560 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SDCBPO00560 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
SDCBPO00560 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
SDCBPO00560 CICP4-201ENST00000447359 2812 ntBASIC13.29□□□□□ -0.28
SDCBPO00560 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SDCBPO00560 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SDCBPO00560 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.29□□□□□ -0.28
SDCBPO00560 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SDCBPO00560 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.29□□□□□ -0.28
SDCBPO00560 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SDCBPO00560 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.29□□□□□ -0.28
SDCBPO00560 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.29□□□□□ -0.28
SDCBPO00560 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SDCBPO00560 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.29□□□□□ -0.28
SDCBPO00560 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SDCBPO00560 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SDCBPO00560 FOXO1B-201ENST00000504678 1527 ntBASIC13.29□□□□□ -0.28
SDCBPO00560 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SDCBPO00560 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SDCBPO00560 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SDCBPO00560 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SDCBPO00560 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SDCBPO00560 INTS4P1-203ENST00000641008 3683 ntBASIC13.28□□□□□ -0.28
SDCBPO00560 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SDCBPO00560 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SDCBPO00560 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SDCBPO00560 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.28□□□□□ -0.28
SDCBPO00560 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SDCBPO00560 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SDCBPO00560 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SDCBPO00560 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SDCBPO00560 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
SDCBPO00560 HLA-H-201ENST00000383620 1096 ntBASIC13.28□□□□□ -0.28
SDCBPO00560 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.28□□□□□ -0.28
SDCBPO00560 AC142381.1-201ENST00000426099 345 ntBASIC13.28□□□□□ -0.28
SDCBPO00560 AL592309.1-201ENST00000443127 649 ntBASIC13.28□□□□□ -0.28
SDCBPO00560 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
SDCBPO00560 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.28□□□□□ -0.28
SDCBPO00560 CEND1P1-201ENST00000451006 455 ntBASIC13.28□□□□□ -0.28
SDCBPO00560 ALG1L5P-201ENST00000482043 771 ntBASIC13.28□□□□□ -0.28
SDCBPO00560 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.28□□□□□ -0.28
SDCBPO00560 KRT8P23-201ENST00000560090 1207 ntBASIC13.28□□□□□ -0.28
SDCBPO00560 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.28□□□□□ -0.28
SDCBPO00560 AP000842.3-202ENST00000569238 1080 ntBASIC13.28□□□□□ -0.28
SDCBPO00560 AC061975.2-201ENST00000581722 295 ntBASIC13.28□□□□□ -0.28
SDCBPO00560 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.28□□□□□ -0.28
SDCBPO00560 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.28□□□□□ -0.28
SDCBPO00560 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms