Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
CCDC188H7C350 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC188H7C350 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC188H7C350 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC188H7C350 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC188H7C350 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC188H7C350 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC188H7C350 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
CCDC188H7C350 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC188H7C350 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC188H7C350 AP3S2-216ENST00000617003 1561 ntBASIC16.17■□□□□ 0.18
CCDC188H7C350 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC188H7C350 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC188H7C350 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.16■□□□□ 0.18
CCDC188H7C350 AC041040.2-201ENST00000622926 2899 ntBASIC16.16■□□□□ 0.18
CCDC188H7C350 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC188H7C350 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC188H7C350 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC188H7C350 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC188H7C350 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC188H7C350 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC188H7C350 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC188H7C350 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC188H7C350 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
CCDC188H7C350 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC188H7C350 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC188H7C350 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC188H7C350 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC188H7C350 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC188H7C350 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC188H7C350 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC188H7C350 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC188H7C350 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC188H7C350 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC188H7C350 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC188H7C350 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CCDC188H7C350 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC188H7C350 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
CCDC188H7C350 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC188H7C350 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC188H7C350 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
CCDC188H7C350 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.16■□□□□ 0.18
CCDC188H7C350 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC188H7C350 ADH5P3-201ENST00000433842 1137 ntBASIC16.16■□□□□ 0.18
CCDC188H7C350 SPCS2P4-201ENST00000436160 681 ntBASIC16.16■□□□□ 0.18
CCDC188H7C350 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC188H7C350 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC188H7C350 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC188H7C350 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.16■□□□□ 0.18
CCDC188H7C350 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC188H7C350 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC188H7C350 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CCDC188H7C350 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC188H7C350 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC188H7C350 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CCDC188H7C350 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC188H7C350 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC188H7C350 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
CCDC188H7C350 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC188H7C350 AC006504.5-208ENST00000588784 2401 ntBASIC16.16■□□□□ 0.18
CCDC188H7C350 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC188H7C350 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC188H7C350 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC188H7C350 AC012508.2-201ENST00000567613 1472 ntBASIC16.16■□□□□ 0.18
CCDC188H7C350 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC188H7C350 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC188H7C350 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC188H7C350 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC188H7C350 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC188H7C350 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC188H7C350 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC188H7C350 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC188H7C350 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC188H7C350 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
CCDC188H7C350 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
CCDC188H7C350 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC188H7C350 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CCDC188H7C350 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC188H7C350 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC188H7C350 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC188H7C350 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CCDC188H7C350 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC188H7C350 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC188H7C350 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC188H7C350 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC188H7C350 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC188H7C350 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC188H7C350 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC188H7C350 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.15■□□□□ 0.18
CCDC188H7C350 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC188H7C350 IGHV3-62-201ENST00000520057 340 ntBASIC16.15■□□□□ 0.18
CCDC188H7C350 AC136759.1-202ENST00000530858 2194 ntBASIC16.15■□□□□ 0.18
CCDC188H7C350 SLC25A6P4-201ENST00000586535 553 ntBASIC16.15■□□□□ 0.18
CCDC188H7C350 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC188H7C350 AC091812.2-201ENST00000619081 385 ntBASIC16.15■□□□□ 0.18
CCDC188H7C350 AL645728.2-202ENST00000641679 227 ntBASIC16.15■□□□□ 0.18
CCDC188H7C350 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC188H7C350 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CCDC188H7C350 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC188H7C350 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms