Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 HSPB1P2-201ENST00000448722 546 ntBASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 ENPP7P14-201ENST00000621765 1040 ntBASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 PRSS30P-206ENST00000641773 873 ntBASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CCDC187A0A096LP49 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 AL645937.2-201ENST00000396808 931 ntBASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 AC126915.1-201ENST00000522847 1038 ntBASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 FOS-206ENST00000555347 1280 ntTSL 2 BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 AC244157.2-201ENST00000616239 1006 ntBASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 AC148477.4-201ENST00000613430 1793 ntBASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms