Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV18A0A075B6X5 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV18A0A075B6X5 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV18A0A075B6X5 CRYGEP-201ENST00000412192 528 ntBASIC13.43□□□□□ -0.26
TRAV18A0A075B6X5 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC13.43□□□□□ -0.26
TRAV18A0A075B6X5 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.43□□□□□ -0.26
TRAV18A0A075B6X5 AC140658.5-201ENST00000438532 169 ntBASIC13.43□□□□□ -0.26
TRAV18A0A075B6X5 HCG4P8-203ENST00000443049 980 ntBASIC13.43□□□□□ -0.26
TRAV18A0A075B6X5 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
TRAV18A0A075B6X5 SKP2-204ENST00000508514 821 ntTSL 3 BASIC13.43□□□□□ -0.26
TRAV18A0A075B6X5 CD63-210ENST00000550776 870 ntTSL 5 BASIC13.43□□□□□ -0.26
TRAV18A0A075B6X5 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
TRAV18A0A075B6X5 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
TRAV18A0A075B6X5 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV18A0A075B6X5 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV18A0A075B6X5 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV18A0A075B6X5 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV18A0A075B6X5 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV18A0A075B6X5 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
TRAV18A0A075B6X5 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
TRAV18A0A075B6X5 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV18A0A075B6X5 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV18A0A075B6X5 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
TRAV18A0A075B6X5 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV18A0A075B6X5 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.43□□□□□ -0.26
TRAV18A0A075B6X5 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAV18A0A075B6X5 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 ACE3P-201ENST00000423435 1973 ntBASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 FAM197Y8-203ENST00000450145 560 ntBASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 TCAP-202ENST00000578283 583 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 TBCB-205ENST00000585746 875 ntTSL 3 BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 AC007064.4-201ENST00000637740 555 ntBASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 BX640514.1-201ENST00000583223 1918 ntBASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV18A0A075B6X5 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV18A0A075B6X5 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV18A0A075B6X5 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.41□□□□□ -0.26
TRAV18A0A075B6X5 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV18A0A075B6X5 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV18A0A075B6X5 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.41□□□□□ -0.26
TRAV18A0A075B6X5 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV18A0A075B6X5 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV18A0A075B6X5 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV18A0A075B6X5 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV18A0A075B6X5 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV18A0A075B6X5 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV18A0A075B6X5 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
TRAV18A0A075B6X5 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV18A0A075B6X5 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV18A0A075B6X5 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TRAV18A0A075B6X5 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TRAV18A0A075B6X5 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV18A0A075B6X5 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV18A0A075B6X5 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.41□□□□□ -0.26
TRAV18A0A075B6X5 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
TRAV18A0A075B6X5 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV18A0A075B6X5 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms