Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGB4Q9UN71 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGB4Q9UN71 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
PCDHGB4Q9UN71 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGB4Q9UN71 C9orf163-202ENST00000624034 2573 ntBASIC22.35■■□□□ 1.17
PCDHGB4Q9UN71 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
PCDHGB4Q9UN71 KRT18P10-201ENST00000388836 1287 ntBASIC22.34■■□□□ 1.17
PCDHGB4Q9UN71 GFER-205ENST00000569451 517 ntTSL 5 BASIC22.34■■□□□ 1.17
PCDHGB4Q9UN71 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC22.34■■□□□ 1.17
PCDHGB4Q9UN71 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHGB4Q9UN71 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
PCDHGB4Q9UN71 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.34■■□□□ 1.17
PCDHGB4Q9UN71 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHGB4Q9UN71 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHGB4Q9UN71 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHGB4Q9UN71 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC22.33■■□□□ 1.17
PCDHGB4Q9UN71 GPX1-201ENST00000419349 1106 ntBASIC22.33■■□□□ 1.17
PCDHGB4Q9UN71 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHGB4Q9UN71 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC22.33■■□□□ 1.17
PCDHGB4Q9UN71 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC22.33■■□□□ 1.16
PCDHGB4Q9UN71 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PCDHGB4Q9UN71 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGB4Q9UN71 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGB4Q9UN71 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGB4Q9UN71 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
PCDHGB4Q9UN71 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
PCDHGB4Q9UN71 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGB4Q9UN71 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGB4Q9UN71 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGB4Q9UN71 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.31■■□□□ 1.16
PCDHGB4Q9UN71 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
PCDHGB4Q9UN71 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGB4Q9UN71 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGB4Q9UN71 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGB4Q9UN71 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
PCDHGB4Q9UN71 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGB4Q9UN71 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC22.31■■□□□ 1.16
PCDHGB4Q9UN71 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.31■■□□□ 1.16
PCDHGB4Q9UN71 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGB4Q9UN71 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.31■■□□□ 1.16
PCDHGB4Q9UN71 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGB4Q9UN71 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
PCDHGB4Q9UN71 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.31■■□□□ 1.16
PCDHGB4Q9UN71 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGB4Q9UN71 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGB4Q9UN71 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC22.3■■□□□ 1.16
PCDHGB4Q9UN71 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGB4Q9UN71 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGB4Q9UN71 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGB4Q9UN71 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGB4Q9UN71 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.3■■□□□ 1.16
PCDHGB4Q9UN71 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
PCDHGB4Q9UN71 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC22.3■■□□□ 1.16
PCDHGB4Q9UN71 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGB4Q9UN71 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGB4Q9UN71 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGB4Q9UN71 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGB4Q9UN71 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.29■■□□□ 1.16
PCDHGB4Q9UN71 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
PCDHGB4Q9UN71 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGB4Q9UN71 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGB4Q9UN71 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
PCDHGB4Q9UN71 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC22.29■■□□□ 1.16
PCDHGB4Q9UN71 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
PCDHGB4Q9UN71 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC22.29■■□□□ 1.16
PCDHGB4Q9UN71 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGB4Q9UN71 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.29■■□□□ 1.16
PCDHGB4Q9UN71 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGB4Q9UN71 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGB4Q9UN71 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGB4Q9UN71 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGB4Q9UN71 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDHGB4Q9UN71 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGB4Q9UN71 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDHGB4Q9UN71 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC22.28■■□□□ 1.16
PCDHGB4Q9UN71 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDHGB4Q9UN71 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
PCDHGB4Q9UN71 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGB4Q9UN71 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGB4Q9UN71 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDHGB4Q9UN71 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGB4Q9UN71 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC22.28■■□□□ 1.16
PCDHGB4Q9UN71 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGB4Q9UN71 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGB4Q9UN71 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGB4Q9UN71 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGB4Q9UN71 DUSP8P5-201ENST00000422884 1815 ntBASIC22.27■■□□□ 1.16
PCDHGB4Q9UN71 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGB4Q9UN71 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGB4Q9UN71 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
PCDHGB4Q9UN71 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGB4Q9UN71 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC22.27■■□□□ 1.16
PCDHGB4Q9UN71 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGB4Q9UN71 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGB4Q9UN71 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGB4Q9UN71 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGB4Q9UN71 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
PCDHGB4Q9UN71 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.26■■□□□ 1.15
PCDHGB4Q9UN71 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGB4Q9UN71 RAP2CP1-202ENST00000605179 643 ntBASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms