Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 EDA-201ENST00000338901 1233 ntBASIC25.76■■□□□ 1.71
TRMT13Q9NUP7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC25.76■■□□□ 1.71
TRMT13Q9NUP7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
TRMT13Q9NUP7 AL355001.2-201ENST00000620617 1191 ntBASIC25.76■■□□□ 1.71
TRMT13Q9NUP7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
TRMT13Q9NUP7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
TRMT13Q9NUP7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
TRMT13Q9NUP7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
TRMT13Q9NUP7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
TRMT13Q9NUP7 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.75■■□□□ 1.71
TRMT13Q9NUP7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
TRMT13Q9NUP7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC25.75■■□□□ 1.71
TRMT13Q9NUP7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC25.75■■□□□ 1.71
TRMT13Q9NUP7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC25.75■■□□□ 1.71
TRMT13Q9NUP7 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
TRMT13Q9NUP7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
TRMT13Q9NUP7 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
TRMT13Q9NUP7 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
TRMT13Q9NUP7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
TRMT13Q9NUP7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
TRMT13Q9NUP7 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.74■■□□□ 1.71
TRMT13Q9NUP7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
TRMT13Q9NUP7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC25.74■■□□□ 1.71
TRMT13Q9NUP7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TRMT13Q9NUP7 AC004448.1-201ENST00000458332 883 ntBASIC25.74■■□□□ 1.71
TRMT13Q9NUP7 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
TRMT13Q9NUP7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
TRMT13Q9NUP7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
TRMT13Q9NUP7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
TRMT13Q9NUP7 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.73■■□□□ 1.71
TRMT13Q9NUP7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC25.73■■□□□ 1.71
TRMT13Q9NUP7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.73■■□□□ 1.71
TRMT13Q9NUP7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
TRMT13Q9NUP7 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
TRMT13Q9NUP7 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
TRMT13Q9NUP7 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
TRMT13Q9NUP7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
TRMT13Q9NUP7 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
TRMT13Q9NUP7 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
TRMT13Q9NUP7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
TRMT13Q9NUP7 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
TRMT13Q9NUP7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
TRMT13Q9NUP7 AC105265.2-201ENST00000467189 838 ntBASIC25.7■■□□□ 1.7
TRMT13Q9NUP7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC25.7■■□□□ 1.7
TRMT13Q9NUP7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
TRMT13Q9NUP7 AF213884.3-201ENST00000563833 479 ntBASIC25.7■■□□□ 1.7
TRMT13Q9NUP7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
TRMT13Q9NUP7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
TRMT13Q9NUP7 AL136967.2-201ENST00000623968 743 ntBASIC25.7■■□□□ 1.7
TRMT13Q9NUP7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC25.69■■□□□ 1.7
TRMT13Q9NUP7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
TRMT13Q9NUP7 GRAMD4P4-201ENST00000613563 1115 ntBASIC25.69■■□□□ 1.7
TRMT13Q9NUP7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
TRMT13Q9NUP7 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
TRMT13Q9NUP7 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
TRMT13Q9NUP7 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
TRMT13Q9NUP7 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.68■■□□□ 1.7
TRMT13Q9NUP7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
TRMT13Q9NUP7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
TRMT13Q9NUP7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC25.68■■□□□ 1.7
TRMT13Q9NUP7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
TRMT13Q9NUP7 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC25.68■■□□□ 1.7
TRMT13Q9NUP7 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
TRMT13Q9NUP7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
TRMT13Q9NUP7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
TRMT13Q9NUP7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
TRMT13Q9NUP7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
TRMT13Q9NUP7 AC005703.6-201ENST00000623265 1329 ntBASIC25.66■■□□□ 1.7
TRMT13Q9NUP7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
TRMT13Q9NUP7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
TRMT13Q9NUP7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TRMT13Q9NUP7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
TRMT13Q9NUP7 AC010501.1-201ENST00000606270 1962 ntBASIC25.65■■□□□ 1.7
TRMT13Q9NUP7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TRMT13Q9NUP7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
TRMT13Q9NUP7 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC25.65■■□□□ 1.7
TRMT13Q9NUP7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC25.65■■□□□ 1.7
TRMT13Q9NUP7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
TRMT13Q9NUP7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC25.65■■□□□ 1.7
TRMT13Q9NUP7 MIR5787-201ENST00000611784 55 ntBASIC25.65■■□□□ 1.7
TRMT13Q9NUP7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC25.65■■□□□ 1.7
TRMT13Q9NUP7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
TRMT13Q9NUP7 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TRMT13Q9NUP7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
TRMT13Q9NUP7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.65■■□□□ 1.7
TRMT13Q9NUP7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
TRMT13Q9NUP7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.64■■□□□ 1.7
TRMT13Q9NUP7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
TRMT13Q9NUP7 MIR939-201ENST00000401314 82 ntBASIC25.64■■□□□ 1.7
TRMT13Q9NUP7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC25.64■■□□□ 1.7
TRMT13Q9NUP7 AP001330.3-201ENST00000520123 633 ntBASIC25.64■■□□□ 1.7
TRMT13Q9NUP7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
TRMT13Q9NUP7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
TRMT13Q9NUP7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
TRMT13Q9NUP7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TRMT13Q9NUP7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC25.63■■□□□ 1.69
TRMT13Q9NUP7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC25.63■■□□□ 1.69
TRMT13Q9NUP7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC25.63■■□□□ 1.69
TRMT13Q9NUP7 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.63■■□□□ 1.69
TRMT13Q9NUP7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 152.8 ms