Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC25.86■■□□□ 1.73
ATP6V0A4Q9HBG4 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.86■■□□□ 1.73
ATP6V0A4Q9HBG4 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
ATP6V0A4Q9HBG4 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.86■■□□□ 1.73
ATP6V0A4Q9HBG4 TSPY9P-201ENST00000440215 945 ntBASIC25.86■■□□□ 1.73
ATP6V0A4Q9HBG4 TSPY11P-201ENST00000442607 1045 ntBASIC25.86■■□□□ 1.73
ATP6V0A4Q9HBG4 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC25.86■■□□□ 1.73
ATP6V0A4Q9HBG4 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
ATP6V0A4Q9HBG4 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
ATP6V0A4Q9HBG4 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
ATP6V0A4Q9HBG4 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
ATP6V0A4Q9HBG4 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
ATP6V0A4Q9HBG4 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
ATP6V0A4Q9HBG4 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC25.85■■□□□ 1.73
ATP6V0A4Q9HBG4 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
ATP6V0A4Q9HBG4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
ATP6V0A4Q9HBG4 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC25.85■■□□□ 1.73
ATP6V0A4Q9HBG4 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
ATP6V0A4Q9HBG4 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
ATP6V0A4Q9HBG4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.85■■□□□ 1.73
ATP6V0A4Q9HBG4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
ATP6V0A4Q9HBG4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
ATP6V0A4Q9HBG4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25.84■■□□□ 1.73
ATP6V0A4Q9HBG4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC25.84■■□□□ 1.73
ATP6V0A4Q9HBG4 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
ATP6V0A4Q9HBG4 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC25.83■■□□□ 1.73
ATP6V0A4Q9HBG4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
ATP6V0A4Q9HBG4 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
ATP6V0A4Q9HBG4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
ATP6V0A4Q9HBG4 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC25.83■■□□□ 1.73
ATP6V0A4Q9HBG4 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC25.83■■□□□ 1.73
ATP6V0A4Q9HBG4 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC25.83■■□□□ 1.73
ATP6V0A4Q9HBG4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC25.83■■□□□ 1.73
ATP6V0A4Q9HBG4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC25.83■■□□□ 1.73
ATP6V0A4Q9HBG4 LSR-205ENST00000427250 1606 ntTSL 2 BASIC25.83■■□□□ 1.73
ATP6V0A4Q9HBG4 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
ATP6V0A4Q9HBG4 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
ATP6V0A4Q9HBG4 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
ATP6V0A4Q9HBG4 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
ATP6V0A4Q9HBG4 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
ATP6V0A4Q9HBG4 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC25.82■■□□□ 1.72
ATP6V0A4Q9HBG4 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC25.82■■□□□ 1.72
ATP6V0A4Q9HBG4 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC25.82■■□□□ 1.72
ATP6V0A4Q9HBG4 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
ATP6V0A4Q9HBG4 AC022211.4-201ENST00000625094 2161 ntBASIC25.82■■□□□ 1.72
ATP6V0A4Q9HBG4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC25.81■■□□□ 1.72
ATP6V0A4Q9HBG4 AC092028.1-203ENST00000608262 953 ntBASIC25.81■■□□□ 1.72
ATP6V0A4Q9HBG4 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ATP6V0A4Q9HBG4 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
ATP6V0A4Q9HBG4 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
ATP6V0A4Q9HBG4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
ATP6V0A4Q9HBG4 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
ATP6V0A4Q9HBG4 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
ATP6V0A4Q9HBG4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC25.8■■□□□ 1.72
ATP6V0A4Q9HBG4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC25.8■■□□□ 1.72
ATP6V0A4Q9HBG4 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
ATP6V0A4Q9HBG4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.8■■□□□ 1.72
ATP6V0A4Q9HBG4 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC25.8■■□□□ 1.72
ATP6V0A4Q9HBG4 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
ATP6V0A4Q9HBG4 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC25.79■■□□□ 1.72
ATP6V0A4Q9HBG4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
ATP6V0A4Q9HBG4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC25.79■■□□□ 1.72
ATP6V0A4Q9HBG4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC25.79■■□□□ 1.72
ATP6V0A4Q9HBG4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
ATP6V0A4Q9HBG4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
ATP6V0A4Q9HBG4 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
ATP6V0A4Q9HBG4 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
ATP6V0A4Q9HBG4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
ATP6V0A4Q9HBG4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
ATP6V0A4Q9HBG4 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
ATP6V0A4Q9HBG4 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
ATP6V0A4Q9HBG4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
ATP6V0A4Q9HBG4 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC25.78■■□□□ 1.72
ATP6V0A4Q9HBG4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC25.78■■□□□ 1.72
ATP6V0A4Q9HBG4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
ATP6V0A4Q9HBG4 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
ATP6V0A4Q9HBG4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
ATP6V0A4Q9HBG4 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
ATP6V0A4Q9HBG4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
ATP6V0A4Q9HBG4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC25.77■■□□□ 1.72
ATP6V0A4Q9HBG4 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
ATP6V0A4Q9HBG4 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.72
ATP6V0A4Q9HBG4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
ATP6V0A4Q9HBG4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC25.76■■□□□ 1.71
ATP6V0A4Q9HBG4 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC25.76■■□□□ 1.71
ATP6V0A4Q9HBG4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC25.76■■□□□ 1.71
ATP6V0A4Q9HBG4 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
ATP6V0A4Q9HBG4 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
ATP6V0A4Q9HBG4 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC25.76■■□□□ 1.71
ATP6V0A4Q9HBG4 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
ATP6V0A4Q9HBG4 AC020928.2-201ENST00000588717 2197 ntBASIC25.76■■□□□ 1.71
ATP6V0A4Q9HBG4 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
ATP6V0A4Q9HBG4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC25.75■■□□□ 1.71
ATP6V0A4Q9HBG4 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
ATP6V0A4Q9HBG4 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
ATP6V0A4Q9HBG4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC25.74■■□□□ 1.71
ATP6V0A4Q9HBG4 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.74■■□□□ 1.71
ATP6V0A4Q9HBG4 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
ATP6V0A4Q9HBG4 LBH-205ENST00000407930 756 ntTSL 2 BASIC25.74■■□□□ 1.71
ATP6V0A4Q9HBG4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC25.74■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms