Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CHMP4BQ9H444 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC29.29■■■□□ 2.28
CHMP4BQ9H444 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC29.28■■■□□ 2.28
CHMP4BQ9H444 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CHMP4BQ9H444 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC29.28■■■□□ 2.28
CHMP4BQ9H444 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CHMP4BQ9H444 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CHMP4BQ9H444 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
CHMP4BQ9H444 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC29.26■■■□□ 2.27
CHMP4BQ9H444 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC29.26■■■□□ 2.27
CHMP4BQ9H444 GUK1-208ENST00000366728 842 ntTSL 2 BASIC29.26■■■□□ 2.27
CHMP4BQ9H444 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC29.26■■■□□ 2.27
CHMP4BQ9H444 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC29.26■■■□□ 2.27
CHMP4BQ9H444 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
CHMP4BQ9H444 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC29.25■■■□□ 2.27
CHMP4BQ9H444 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC29.25■■■□□ 2.27
CHMP4BQ9H444 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
CHMP4BQ9H444 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC29.25■■■□□ 2.27
CHMP4BQ9H444 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
CHMP4BQ9H444 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC29.24■■■□□ 2.27
CHMP4BQ9H444 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC29.24■■■□□ 2.27
CHMP4BQ9H444 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
CHMP4BQ9H444 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC29.24■■■□□ 2.27
CHMP4BQ9H444 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC29.23■■■□□ 2.27
CHMP4BQ9H444 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC29.23■■■□□ 2.27
CHMP4BQ9H444 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC29.23■■■□□ 2.27
CHMP4BQ9H444 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC29.23■■■□□ 2.27
CHMP4BQ9H444 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CHMP4BQ9H444 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC29.23■■■□□ 2.27
CHMP4BQ9H444 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CHMP4BQ9H444 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC29.23■■■□□ 2.27
CHMP4BQ9H444 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
CHMP4BQ9H444 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC29.23■■■□□ 2.27
CHMP4BQ9H444 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC29.23■■■□□ 2.27
CHMP4BQ9H444 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CHMP4BQ9H444 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC29.22■■■□□ 2.27
CHMP4BQ9H444 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CHMP4BQ9H444 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
CHMP4BQ9H444 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
CHMP4BQ9H444 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
CHMP4BQ9H444 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC29.21■■■□□ 2.27
CHMP4BQ9H444 KRT18P24-201ENST00000344739 1156 ntBASIC29.21■■■□□ 2.27
CHMP4BQ9H444 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
CHMP4BQ9H444 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC29.21■■■□□ 2.27
CHMP4BQ9H444 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC29.21■■■□□ 2.27
CHMP4BQ9H444 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
CHMP4BQ9H444 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
CHMP4BQ9H444 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
CHMP4BQ9H444 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
CHMP4BQ9H444 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
CHMP4BQ9H444 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
CHMP4BQ9H444 SHD-204ENST00000599689 1729 ntTSL 5 BASIC29.2■■■□□ 2.27
CHMP4BQ9H444 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.26
CHMP4BQ9H444 GAK-223ENST00000628912 497 ntTSL 5 BASIC29.2■■■□□ 2.26
CHMP4BQ9H444 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
CHMP4BQ9H444 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC29.2■■■□□ 2.26
CHMP4BQ9H444 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC29.2■■■□□ 2.26
CHMP4BQ9H444 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
CHMP4BQ9H444 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC29.19■■■□□ 2.26
CHMP4BQ9H444 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC29.19■■■□□ 2.26
CHMP4BQ9H444 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC29.19■■■□□ 2.26
CHMP4BQ9H444 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC29.19■■■□□ 2.26
CHMP4BQ9H444 AC010980.1-201ENST00000587192 1142 ntBASIC29.19■■■□□ 2.26
CHMP4BQ9H444 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CHMP4BQ9H444 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC29.19■■■□□ 2.26
CHMP4BQ9H444 PKM-204ENST00000449901 2526 ntTSL 2 BASIC29.18■■■□□ 2.26
CHMP4BQ9H444 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC29.18■■■□□ 2.26
CHMP4BQ9H444 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC29.18■■■□□ 2.26
CHMP4BQ9H444 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC29.18■■■□□ 2.26
CHMP4BQ9H444 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC29.18■■■□□ 2.26
CHMP4BQ9H444 AL033527.3-201ENST00000566366 1196 ntBASIC29.18■■■□□ 2.26
CHMP4BQ9H444 PVT1_1.1-201ENST00000615125 194 ntBASIC29.18■■■□□ 2.26
CHMP4BQ9H444 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC29.18■■■□□ 2.26
CHMP4BQ9H444 THRA-202ENST00000394121 2260 ntTSL 2 BASIC29.18■■■□□ 2.26
CHMP4BQ9H444 BEX3-202ENST00000372634 753 ntTSL 2 BASIC29.17■■■□□ 2.26
CHMP4BQ9H444 MIR4508-201ENST00000584178 70 ntBASIC29.17■■■□□ 2.26
CHMP4BQ9H444 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC29.17■■■□□ 2.26
CHMP4BQ9H444 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC29.17■■■□□ 2.26
CHMP4BQ9H444 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
CHMP4BQ9H444 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC29.16■■■□□ 2.26
CHMP4BQ9H444 AC004812.2-201ENST00000611079 2094 ntBASIC29.16■■■□□ 2.26
CHMP4BQ9H444 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
CHMP4BQ9H444 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC29.16■■■□□ 2.26
CHMP4BQ9H444 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
CHMP4BQ9H444 AC120024.1-201ENST00000562672 995 ntBASIC29.16■■■□□ 2.26
CHMP4BQ9H444 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
CHMP4BQ9H444 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
CHMP4BQ9H444 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC29.15■■■□□ 2.26
CHMP4BQ9H444 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC29.15■■■□□ 2.26
CHMP4BQ9H444 CD37-213ENST00000598095 1598 ntTSL 2 BASIC29.15■■■□□ 2.26
CHMP4BQ9H444 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC29.15■■■□□ 2.26
CHMP4BQ9H444 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
CHMP4BQ9H444 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC29.15■■■□□ 2.26
CHMP4BQ9H444 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC29.14■■■□□ 2.26
CHMP4BQ9H444 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
CHMP4BQ9H444 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC29.14■■■□□ 2.26
CHMP4BQ9H444 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
CHMP4BQ9H444 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC29.14■■■□□ 2.26
CHMP4BQ9H444 THA1P-201ENST00000590384 1145 ntBASIC29.14■■■□□ 2.26
CHMP4BQ9H444 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC29.14■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms