Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.92■□□□□ 0.62
ZNF48Q96MX3 AL139246.5-201ENST00000606645 996 ntBASIC18.92■□□□□ 0.62
ZNF48Q96MX3 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
ZNF48Q96MX3 ERN1-208ENST00000606895 2068 ntBASIC18.92■□□□□ 0.62
ZNF48Q96MX3 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
ZNF48Q96MX3 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF48Q96MX3 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC18.92■□□□□ 0.62
ZNF48Q96MX3 AC096887.2-201ENST00000623443 1957 ntBASIC18.92■□□□□ 0.62
ZNF48Q96MX3 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF48Q96MX3 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF48Q96MX3 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.91■□□□□ 0.62
ZNF48Q96MX3 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF48Q96MX3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF48Q96MX3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.91■□□□□ 0.62
ZNF48Q96MX3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
ZNF48Q96MX3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
ZNF48Q96MX3 MIR935-201ENST00000401179 91 ntBASIC18.9■□□□□ 0.62
ZNF48Q96MX3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.9■□□□□ 0.62
ZNF48Q96MX3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF48Q96MX3 AL356740.2-201ENST00000601559 647 ntBASIC18.9■□□□□ 0.62
ZNF48Q96MX3 MIR4466-201ENST00000606121 54 ntBASIC18.9■□□□□ 0.62
ZNF48Q96MX3 AC020928.2-201ENST00000588717 2197 ntBASIC18.9■□□□□ 0.62
ZNF48Q96MX3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
ZNF48Q96MX3 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ZNF48Q96MX3 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
ZNF48Q96MX3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF48Q96MX3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.89■□□□□ 0.61
ZNF48Q96MX3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF48Q96MX3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.89■□□□□ 0.61
ZNF48Q96MX3 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.89■□□□□ 0.61
ZNF48Q96MX3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF48Q96MX3 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
ZNF48Q96MX3 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
ZNF48Q96MX3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF48Q96MX3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF48Q96MX3 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.88■□□□□ 0.61
ZNF48Q96MX3 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.88■□□□□ 0.61
ZNF48Q96MX3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.88■□□□□ 0.61
ZNF48Q96MX3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.88■□□□□ 0.61
ZNF48Q96MX3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.88■□□□□ 0.61
ZNF48Q96MX3 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC18.88■□□□□ 0.61
ZNF48Q96MX3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF48Q96MX3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC18.88■□□□□ 0.61
ZNF48Q96MX3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC18.88■□□□□ 0.61
ZNF48Q96MX3 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF48Q96MX3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF48Q96MX3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
ZNF48Q96MX3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.87■□□□□ 0.61
ZNF48Q96MX3 AC090877.2-201ENST00000558441 1738 ntBASIC18.87■□□□□ 0.61
ZNF48Q96MX3 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
ZNF48Q96MX3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF48Q96MX3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF48Q96MX3 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF48Q96MX3 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF48Q96MX3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF48Q96MX3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF48Q96MX3 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF48Q96MX3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
ZNF48Q96MX3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF48Q96MX3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.86■□□□□ 0.61
ZNF48Q96MX3 AL512631.2-201ENST00000604634 923 ntBASIC18.86■□□□□ 0.61
ZNF48Q96MX3 AC110285.6-201ENST00000617652 491 ntBASIC18.86■□□□□ 0.61
ZNF48Q96MX3 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
ZNF48Q96MX3 AC097639.1-201ENST00000565519 1891 ntBASIC18.86■□□□□ 0.61
ZNF48Q96MX3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF48Q96MX3 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF48Q96MX3 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.85■□□□□ 0.61
ZNF48Q96MX3 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF48Q96MX3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF48Q96MX3 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC18.84■□□□□ 0.61
ZNF48Q96MX3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF48Q96MX3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.84■□□□□ 0.61
ZNF48Q96MX3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF48Q96MX3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF48Q96MX3 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF48Q96MX3 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF48Q96MX3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.84■□□□□ 0.61
ZNF48Q96MX3 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF48Q96MX3 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.83■□□□□ 0.61
ZNF48Q96MX3 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
ZNF48Q96MX3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
ZNF48Q96MX3 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZNF48Q96MX3 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZNF48Q96MX3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZNF48Q96MX3 AC096631.2-201ENST00000436136 790 ntBASIC18.83■□□□□ 0.6
ZNF48Q96MX3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.83■□□□□ 0.6
ZNF48Q96MX3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.83■□□□□ 0.6
ZNF48Q96MX3 SNX5-217ENST00000606557 1087 ntBASIC18.83■□□□□ 0.6
ZNF48Q96MX3 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZNF48Q96MX3 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZNF48Q96MX3 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
ZNF48Q96MX3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ZNF48Q96MX3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
ZNF48Q96MX3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF48Q96MX3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.82■□□□□ 0.6
ZNF48Q96MX3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF48Q96MX3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.82■□□□□ 0.6
ZNF48Q96MX3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.82■□□□□ 0.6
ZNF48Q96MX3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.82■□□□□ 0.6
ZNF48Q96MX3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms