Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RNF25Q96BH1 AC012676.1-201ENST00000574705 1949 ntBASIC24.31■■□□□ 1.48
RNF25Q96BH1 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC24.31■■□□□ 1.48
RNF25Q96BH1 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RNF25Q96BH1 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
RNF25Q96BH1 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RNF25Q96BH1 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
RNF25Q96BH1 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC24.31■■□□□ 1.48
RNF25Q96BH1 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC24.31■■□□□ 1.48
RNF25Q96BH1 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RNF25Q96BH1 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
RNF25Q96BH1 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
RNF25Q96BH1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RNF25Q96BH1 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RNF25Q96BH1 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
RNF25Q96BH1 MIR6765-201ENST00000614092 87 ntBASIC24.3■■□□□ 1.48
RNF25Q96BH1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.3■■□□□ 1.48
RNF25Q96BH1 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RNF25Q96BH1 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RNF25Q96BH1 AC068473.5-201ENST00000616428 2072 ntBASIC24.3■■□□□ 1.48
RNF25Q96BH1 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC24.3■■□□□ 1.48
RNF25Q96BH1 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RNF25Q96BH1 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
RNF25Q96BH1 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC24.29■■□□□ 1.48
RNF25Q96BH1 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RNF25Q96BH1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RNF25Q96BH1 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RNF25Q96BH1 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
RNF25Q96BH1 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
RNF25Q96BH1 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RNF25Q96BH1 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RNF25Q96BH1 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC24.28■■□□□ 1.48
RNF25Q96BH1 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC24.28■■□□□ 1.48
RNF25Q96BH1 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RNF25Q96BH1 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RNF25Q96BH1 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RNF25Q96BH1 IDNK-203ENST00000405990 629 ntTSL 2 BASIC24.27■■□□□ 1.48
RNF25Q96BH1 AC087393.1-201ENST00000582896 145 ntBASIC24.27■■□□□ 1.48
RNF25Q96BH1 BRD4-212ENST00000630599 726 ntTSL 2 BASIC24.27■■□□□ 1.48
RNF25Q96BH1 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RNF25Q96BH1 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RNF25Q96BH1 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC24.26■■□□□ 1.47
RNF25Q96BH1 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
RNF25Q96BH1 AC129492.7-201ENST00000622992 756 ntBASIC24.26■■□□□ 1.47
RNF25Q96BH1 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RNF25Q96BH1 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RNF25Q96BH1 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RNF25Q96BH1 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
RNF25Q96BH1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC24.26■■□□□ 1.47
RNF25Q96BH1 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
RNF25Q96BH1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.25■■□□□ 1.47
RNF25Q96BH1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.25■■□□□ 1.47
RNF25Q96BH1 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RNF25Q96BH1 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
RNF25Q96BH1 ABCB10P4-201ENST00000566803 2184 ntBASIC24.25■■□□□ 1.47
RNF25Q96BH1 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC24.25■■□□□ 1.47
RNF25Q96BH1 KRT18P60-201ENST00000312876 1297 ntBASIC24.25■■□□□ 1.47
RNF25Q96BH1 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC24.25■■□□□ 1.47
RNF25Q96BH1 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
RNF25Q96BH1 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC24.25■■□□□ 1.47
RNF25Q96BH1 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RNF25Q96BH1 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
RNF25Q96BH1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.25■■□□□ 1.47
RNF25Q96BH1 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC24.24■■□□□ 1.47
RNF25Q96BH1 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RNF25Q96BH1 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
RNF25Q96BH1 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RNF25Q96BH1 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
RNF25Q96BH1 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RNF25Q96BH1 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
RNF25Q96BH1 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
RNF25Q96BH1 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
RNF25Q96BH1 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
RNF25Q96BH1 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
RNF25Q96BH1 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RNF25Q96BH1 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RNF25Q96BH1 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RNF25Q96BH1 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC24.23■■□□□ 1.47
RNF25Q96BH1 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC24.23■■□□□ 1.47
RNF25Q96BH1 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC24.22■■□□□ 1.47
RNF25Q96BH1 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RNF25Q96BH1 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
RNF25Q96BH1 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC24.22■■□□□ 1.47
RNF25Q96BH1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC24.22■■□□□ 1.47
RNF25Q96BH1 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC24.22■■□□□ 1.47
RNF25Q96BH1 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
RNF25Q96BH1 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
RNF25Q96BH1 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
RNF25Q96BH1 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC24.21■■□□□ 1.47
RNF25Q96BH1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24.21■■□□□ 1.47
RNF25Q96BH1 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC24.21■■□□□ 1.47
RNF25Q96BH1 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RNF25Q96BH1 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RNF25Q96BH1 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC24.21■■□□□ 1.47
RNF25Q96BH1 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC24.21■■□□□ 1.47
RNF25Q96BH1 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC24.21■■□□□ 1.47
RNF25Q96BH1 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RNF25Q96BH1 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
RNF25Q96BH1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC24.21■■□□□ 1.47
RNF25Q96BH1 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 695.5 ms