Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.53■■□□□ 1.68
TMEM40Q8WWA1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC25.53■■□□□ 1.68
TMEM40Q8WWA1 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC25.53■■□□□ 1.68
TMEM40Q8WWA1 AC091060.1-201ENST00000623524 1766 ntBASIC25.53■■□□□ 1.68
TMEM40Q8WWA1 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
TMEM40Q8WWA1 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TMEM40Q8WWA1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TMEM40Q8WWA1 AC110285.6-201ENST00000617652 491 ntBASIC25.52■■□□□ 1.68
TMEM40Q8WWA1 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25.52■■□□□ 1.68
TMEM40Q8WWA1 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
TMEM40Q8WWA1 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.52■■□□□ 1.68
TMEM40Q8WWA1 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TMEM40Q8WWA1 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TMEM40Q8WWA1 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
TMEM40Q8WWA1 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TMEM40Q8WWA1 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
TMEM40Q8WWA1 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
TMEM40Q8WWA1 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
TMEM40Q8WWA1 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
TMEM40Q8WWA1 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
TMEM40Q8WWA1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC25.5■■□□□ 1.67
TMEM40Q8WWA1 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
TMEM40Q8WWA1 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.5■■□□□ 1.67
TMEM40Q8WWA1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC25.5■■□□□ 1.67
TMEM40Q8WWA1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
TMEM40Q8WWA1 RALB-208ENST00000631312 311 ntTSL 5 BASIC25.5■■□□□ 1.67
TMEM40Q8WWA1 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
TMEM40Q8WWA1 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
TMEM40Q8WWA1 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TMEM40Q8WWA1 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TMEM40Q8WWA1 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TMEM40Q8WWA1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC25.49■■□□□ 1.67
TMEM40Q8WWA1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
TMEM40Q8WWA1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC25.49■■□□□ 1.67
TMEM40Q8WWA1 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
TMEM40Q8WWA1 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
TMEM40Q8WWA1 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
TMEM40Q8WWA1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC25.48■■□□□ 1.67
TMEM40Q8WWA1 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
TMEM40Q8WWA1 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
TMEM40Q8WWA1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
TMEM40Q8WWA1 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC25.48■■□□□ 1.67
TMEM40Q8WWA1 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC25.48■■□□□ 1.67
TMEM40Q8WWA1 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
TMEM40Q8WWA1 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
TMEM40Q8WWA1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC25.47■■□□□ 1.67
TMEM40Q8WWA1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC25.47■■□□□ 1.67
TMEM40Q8WWA1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
TMEM40Q8WWA1 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
TMEM40Q8WWA1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
TMEM40Q8WWA1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC25.46■■□□□ 1.67
TMEM40Q8WWA1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC25.46■■□□□ 1.67
TMEM40Q8WWA1 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
TMEM40Q8WWA1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
TMEM40Q8WWA1 AC096631.2-201ENST00000436136 790 ntBASIC25.46■■□□□ 1.67
TMEM40Q8WWA1 AC004448.1-201ENST00000458332 883 ntBASIC25.46■■□□□ 1.67
TMEM40Q8WWA1 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
TMEM40Q8WWA1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC25.46■■□□□ 1.67
TMEM40Q8WWA1 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
TMEM40Q8WWA1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC25.45■■□□□ 1.67
TMEM40Q8WWA1 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.67
TMEM40Q8WWA1 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.67
TMEM40Q8WWA1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
TMEM40Q8WWA1 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC25.45■■□□□ 1.66
TMEM40Q8WWA1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC25.45■■□□□ 1.66
TMEM40Q8WWA1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC25.45■■□□□ 1.66
TMEM40Q8WWA1 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC25.45■■□□□ 1.66
TMEM40Q8WWA1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC25.45■■□□□ 1.66
TMEM40Q8WWA1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
TMEM40Q8WWA1 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
TMEM40Q8WWA1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
TMEM40Q8WWA1 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC25.44■■□□□ 1.66
TMEM40Q8WWA1 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
TMEM40Q8WWA1 AC145676.1-201ENST00000514988 2004 ntBASIC25.44■■□□□ 1.66
TMEM40Q8WWA1 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.44■■□□□ 1.66
TMEM40Q8WWA1 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC25.43■■□□□ 1.66
TMEM40Q8WWA1 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
TMEM40Q8WWA1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC25.43■■□□□ 1.66
TMEM40Q8WWA1 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC25.43■■□□□ 1.66
TMEM40Q8WWA1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
TMEM40Q8WWA1 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.42■■□□□ 1.66
TMEM40Q8WWA1 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC25.42■■□□□ 1.66
TMEM40Q8WWA1 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TMEM40Q8WWA1 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC25.42■■□□□ 1.66
TMEM40Q8WWA1 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC25.42■■□□□ 1.66
TMEM40Q8WWA1 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC25.42■■□□□ 1.66
TMEM40Q8WWA1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
TMEM40Q8WWA1 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
TMEM40Q8WWA1 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
TMEM40Q8WWA1 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
TMEM40Q8WWA1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
TMEM40Q8WWA1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC25.4■■□□□ 1.66
TMEM40Q8WWA1 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
TMEM40Q8WWA1 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC25.4■■□□□ 1.66
TMEM40Q8WWA1 AC131274.2-201ENST00000580697 1507 ntBASIC25.4■■□□□ 1.66
TMEM40Q8WWA1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC25.4■■□□□ 1.66
TMEM40Q8WWA1 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
TMEM40Q8WWA1 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TMEM40Q8WWA1 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
TMEM40Q8WWA1 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms