Protein–RNA interactions for Protein: Q8TBB1

LNX1, E3 ubiquitin-protein ligase LNX, humanhuman

Predicted RBP Predictions only

Length 728 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LNX1Q8TBB1 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC25.36■■□□□ 1.65
LNX1Q8TBB1 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
LNX1Q8TBB1 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
LNX1Q8TBB1 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC25.36■■□□□ 1.65
LNX1Q8TBB1 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
LNX1Q8TBB1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
LNX1Q8TBB1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC25.36■■□□□ 1.65
LNX1Q8TBB1 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
LNX1Q8TBB1 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
LNX1Q8TBB1 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC25.36■■□□□ 1.65
LNX1Q8TBB1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
LNX1Q8TBB1 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
LNX1Q8TBB1 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
LNX1Q8TBB1 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC25.35■■□□□ 1.65
LNX1Q8TBB1 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
LNX1Q8TBB1 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
LNX1Q8TBB1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC25.34■■□□□ 1.65
LNX1Q8TBB1 GRAMD4P7-201ENST00000578182 1232 ntBASIC25.34■■□□□ 1.65
LNX1Q8TBB1 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
LNX1Q8TBB1 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
LNX1Q8TBB1 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
LNX1Q8TBB1 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
LNX1Q8TBB1 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
LNX1Q8TBB1 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC25.33■■□□□ 1.65
LNX1Q8TBB1 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
LNX1Q8TBB1 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
LNX1Q8TBB1 AC021242.3-201ENST00000607598 1377 ntBASIC25.32■■□□□ 1.64
LNX1Q8TBB1 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
LNX1Q8TBB1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
LNX1Q8TBB1 UNC93B8-201ENST00000511903 705 ntBASIC25.32■■□□□ 1.64
LNX1Q8TBB1 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC25.32■■□□□ 1.64
LNX1Q8TBB1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC25.32■■□□□ 1.64
LNX1Q8TBB1 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
LNX1Q8TBB1 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
LNX1Q8TBB1 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
LNX1Q8TBB1 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.31■■□□□ 1.64
LNX1Q8TBB1 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LNX1Q8TBB1 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
LNX1Q8TBB1 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
LNX1Q8TBB1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC25.31■■□□□ 1.64
LNX1Q8TBB1 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC25.31■■□□□ 1.64
LNX1Q8TBB1 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
LNX1Q8TBB1 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC25.3■■□□□ 1.64
LNX1Q8TBB1 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.3■■□□□ 1.64
LNX1Q8TBB1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC25.3■■□□□ 1.64
LNX1Q8TBB1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC25.3■■□□□ 1.64
LNX1Q8TBB1 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
LNX1Q8TBB1 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
LNX1Q8TBB1 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
LNX1Q8TBB1 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LNX1Q8TBB1 MIR4281-201ENST00000580852 62 ntBASIC25.29■■□□□ 1.64
LNX1Q8TBB1 AP003733.4-201ENST00000623785 1697 ntBASIC25.29■■□□□ 1.64
LNX1Q8TBB1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LNX1Q8TBB1 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LNX1Q8TBB1 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC25.28■■□□□ 1.64
LNX1Q8TBB1 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LNX1Q8TBB1 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LNX1Q8TBB1 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
LNX1Q8TBB1 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
LNX1Q8TBB1 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC25.28■■□□□ 1.64
LNX1Q8TBB1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC25.28■■□□□ 1.64
LNX1Q8TBB1 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC25.28■■□□□ 1.64
LNX1Q8TBB1 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC25.28■■□□□ 1.64
LNX1Q8TBB1 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LNX1Q8TBB1 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LNX1Q8TBB1 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC25.28■■□□□ 1.64
LNX1Q8TBB1 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
LNX1Q8TBB1 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
LNX1Q8TBB1 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
LNX1Q8TBB1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC25.27■■□□□ 1.64
LNX1Q8TBB1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC25.27■■□□□ 1.64
LNX1Q8TBB1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC25.27■■□□□ 1.64
LNX1Q8TBB1 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC25.27■■□□□ 1.64
LNX1Q8TBB1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
LNX1Q8TBB1 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
LNX1Q8TBB1 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
LNX1Q8TBB1 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
LNX1Q8TBB1 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.26■■□□□ 1.63
LNX1Q8TBB1 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
LNX1Q8TBB1 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
LNX1Q8TBB1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC25.25■■□□□ 1.63
LNX1Q8TBB1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC25.25■■□□□ 1.63
LNX1Q8TBB1 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
LNX1Q8TBB1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
LNX1Q8TBB1 EED-207ENST00000528180 1745 ntTSL 5 BASIC25.25■■□□□ 1.63
LNX1Q8TBB1 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
LNX1Q8TBB1 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC25.25■■□□□ 1.63
LNX1Q8TBB1 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC25.25■■□□□ 1.63
LNX1Q8TBB1 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
LNX1Q8TBB1 THRA-202ENST00000394121 2260 ntTSL 2 BASIC25.24■■□□□ 1.63
LNX1Q8TBB1 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
LNX1Q8TBB1 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
LNX1Q8TBB1 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
LNX1Q8TBB1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC25.24■■□□□ 1.63
LNX1Q8TBB1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC25.24■■□□□ 1.63
LNX1Q8TBB1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC25.24■■□□□ 1.63
LNX1Q8TBB1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC25.24■■□□□ 1.63
LNX1Q8TBB1 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
LNX1Q8TBB1 LINC01124-201ENST00000409786 2117 ntBASIC25.24■■□□□ 1.63
LNX1Q8TBB1 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC25.24■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms