Protein–RNA interactions for Protein: Q8TBB1

LNX1, E3 ubiquitin-protein ligase LNX, humanhuman

Predicted RBP Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LNX1Q8TBB1 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC25.36■■□□□ 1.65
LNX1Q8TBB1 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
LNX1Q8TBB1 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
LNX1Q8TBB1 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC25.36■■□□□ 1.65
LNX1Q8TBB1 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
LNX1Q8TBB1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
LNX1Q8TBB1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC25.36■■□□□ 1.65
LNX1Q8TBB1 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
LNX1Q8TBB1 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
LNX1Q8TBB1 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC25.36■■□□□ 1.65
LNX1Q8TBB1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
LNX1Q8TBB1 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
LNX1Q8TBB1 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
LNX1Q8TBB1 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC25.35■■□□□ 1.65
LNX1Q8TBB1 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
LNX1Q8TBB1 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
LNX1Q8TBB1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC25.34■■□□□ 1.65
LNX1Q8TBB1 GRAMD4P7-201ENST00000578182 1232 ntBASIC25.34■■□□□ 1.65
LNX1Q8TBB1 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
LNX1Q8TBB1 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
LNX1Q8TBB1 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
LNX1Q8TBB1 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
LNX1Q8TBB1 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
LNX1Q8TBB1 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC25.33■■□□□ 1.65
LNX1Q8TBB1 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
LNX1Q8TBB1 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
LNX1Q8TBB1 AC021242.3-201ENST00000607598 1377 ntBASIC25.32■■□□□ 1.64
LNX1Q8TBB1 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
LNX1Q8TBB1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
LNX1Q8TBB1 UNC93B8-201ENST00000511903 705 ntBASIC25.32■■□□□ 1.64
LNX1Q8TBB1 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC25.32■■□□□ 1.64
LNX1Q8TBB1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC25.32■■□□□ 1.64
LNX1Q8TBB1 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
LNX1Q8TBB1 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
LNX1Q8TBB1 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
LNX1Q8TBB1 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.31■■□□□ 1.64
LNX1Q8TBB1 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LNX1Q8TBB1 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
LNX1Q8TBB1 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
LNX1Q8TBB1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC25.31■■□□□ 1.64
LNX1Q8TBB1 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC25.31■■□□□ 1.64
LNX1Q8TBB1 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
LNX1Q8TBB1 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC25.3■■□□□ 1.64
LNX1Q8TBB1 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.3■■□□□ 1.64
LNX1Q8TBB1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC25.3■■□□□ 1.64
LNX1Q8TBB1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC25.3■■□□□ 1.64
LNX1Q8TBB1 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
LNX1Q8TBB1 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
LNX1Q8TBB1 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
LNX1Q8TBB1 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LNX1Q8TBB1 MIR4281-201ENST00000580852 62 ntBASIC25.29■■□□□ 1.64
LNX1Q8TBB1 AP003733.4-201ENST00000623785 1697 ntBASIC25.29■■□□□ 1.64
LNX1Q8TBB1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LNX1Q8TBB1 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LNX1Q8TBB1 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC25.28■■□□□ 1.64
LNX1Q8TBB1 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LNX1Q8TBB1 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LNX1Q8TBB1 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
LNX1Q8TBB1 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
LNX1Q8TBB1 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC25.28■■□□□ 1.64
LNX1Q8TBB1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC25.28■■□□□ 1.64
LNX1Q8TBB1 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC25.28■■□□□ 1.64
LNX1Q8TBB1 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC25.28■■□□□ 1.64
LNX1Q8TBB1 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LNX1Q8TBB1 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LNX1Q8TBB1 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC25.28■■□□□ 1.64
LNX1Q8TBB1 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
LNX1Q8TBB1 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
LNX1Q8TBB1 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
LNX1Q8TBB1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC25.27■■□□□ 1.64
LNX1Q8TBB1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC25.27■■□□□ 1.64
LNX1Q8TBB1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC25.27■■□□□ 1.64
LNX1Q8TBB1 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC25.27■■□□□ 1.64
LNX1Q8TBB1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
LNX1Q8TBB1 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
LNX1Q8TBB1 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
LNX1Q8TBB1 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
LNX1Q8TBB1 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.26■■□□□ 1.63
LNX1Q8TBB1 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
LNX1Q8TBB1 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
LNX1Q8TBB1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC25.25■■□□□ 1.63
LNX1Q8TBB1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC25.25■■□□□ 1.63
LNX1Q8TBB1 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
LNX1Q8TBB1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
LNX1Q8TBB1 EED-207ENST00000528180 1745 ntTSL 5 BASIC25.25■■□□□ 1.63
LNX1Q8TBB1 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
LNX1Q8TBB1 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC25.25■■□□□ 1.63
LNX1Q8TBB1 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC25.25■■□□□ 1.63
LNX1Q8TBB1 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
LNX1Q8TBB1 THRA-202ENST00000394121 2260 ntTSL 2 BASIC25.24■■□□□ 1.63
LNX1Q8TBB1 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
LNX1Q8TBB1 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
LNX1Q8TBB1 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
LNX1Q8TBB1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC25.24■■□□□ 1.63
LNX1Q8TBB1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC25.24■■□□□ 1.63
LNX1Q8TBB1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC25.24■■□□□ 1.63
LNX1Q8TBB1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC25.24■■□□□ 1.63
LNX1Q8TBB1 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
LNX1Q8TBB1 LINC01124-201ENST00000409786 2117 ntBASIC25.24■■□□□ 1.63
LNX1Q8TBB1 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC25.24■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms