Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.69■■□□□ 1.38
PAF1Q8N7H5 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PAF1Q8N7H5 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
PAF1Q8N7H5 SLC6A10P-202ENST00000431994 2058 ntBASIC23.69■■□□□ 1.38
PAF1Q8N7H5 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.69■■□□□ 1.38
PAF1Q8N7H5 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PAF1Q8N7H5 KRT18P24-201ENST00000344739 1156 ntBASIC23.68■■□□□ 1.38
PAF1Q8N7H5 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PAF1Q8N7H5 AL451085.2-201ENST00000605085 799 ntBASIC23.68■■□□□ 1.38
PAF1Q8N7H5 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
PAF1Q8N7H5 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PAF1Q8N7H5 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PAF1Q8N7H5 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.68■■□□□ 1.38
PAF1Q8N7H5 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PAF1Q8N7H5 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.67■■□□□ 1.38
PAF1Q8N7H5 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PAF1Q8N7H5 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.67■■□□□ 1.38
PAF1Q8N7H5 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PAF1Q8N7H5 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.67■■□□□ 1.38
PAF1Q8N7H5 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PAF1Q8N7H5 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PAF1Q8N7H5 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.67■■□□□ 1.38
PAF1Q8N7H5 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.67■■□□□ 1.38
PAF1Q8N7H5 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PAF1Q8N7H5 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PAF1Q8N7H5 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PAF1Q8N7H5 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
PAF1Q8N7H5 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.66■■□□□ 1.38
PAF1Q8N7H5 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.66■■□□□ 1.38
PAF1Q8N7H5 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PAF1Q8N7H5 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
PAF1Q8N7H5 AC011551.1-201ENST00000614101 683 ntBASIC23.66■■□□□ 1.38
PAF1Q8N7H5 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PAF1Q8N7H5 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PAF1Q8N7H5 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
PAF1Q8N7H5 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PAF1Q8N7H5 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
PAF1Q8N7H5 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PAF1Q8N7H5 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.65■■□□□ 1.38
PAF1Q8N7H5 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.65■■□□□ 1.38
PAF1Q8N7H5 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.65■■□□□ 1.38
PAF1Q8N7H5 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PAF1Q8N7H5 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PAF1Q8N7H5 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.64■■□□□ 1.38
PAF1Q8N7H5 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
PAF1Q8N7H5 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.64■■□□□ 1.38
PAF1Q8N7H5 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.64■■□□□ 1.38
PAF1Q8N7H5 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.64■■□□□ 1.38
PAF1Q8N7H5 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
PAF1Q8N7H5 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PAF1Q8N7H5 AC135731.1-201ENST00000569415 2548 ntBASIC23.64■■□□□ 1.37
PAF1Q8N7H5 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PAF1Q8N7H5 AC009299.2-201ENST00000482477 511 ntBASIC23.63■■□□□ 1.37
PAF1Q8N7H5 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PAF1Q8N7H5 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PAF1Q8N7H5 AC090877.2-201ENST00000558441 1738 ntBASIC23.63■■□□□ 1.37
PAF1Q8N7H5 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PAF1Q8N7H5 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PAF1Q8N7H5 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PAF1Q8N7H5 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PAF1Q8N7H5 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PAF1Q8N7H5 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PAF1Q8N7H5 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PAF1Q8N7H5 BX664725.1-201ENST00000438252 379 ntBASIC23.62■■□□□ 1.37
PAF1Q8N7H5 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.62■■□□□ 1.37
PAF1Q8N7H5 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PAF1Q8N7H5 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PAF1Q8N7H5 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.62■■□□□ 1.37
PAF1Q8N7H5 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PAF1Q8N7H5 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
PAF1Q8N7H5 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.62■■□□□ 1.37
PAF1Q8N7H5 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
PAF1Q8N7H5 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.61■■□□□ 1.37
PAF1Q8N7H5 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.61■■□□□ 1.37
PAF1Q8N7H5 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.61■■□□□ 1.37
PAF1Q8N7H5 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.61■■□□□ 1.37
PAF1Q8N7H5 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
PAF1Q8N7H5 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
PAF1Q8N7H5 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PAF1Q8N7H5 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PAF1Q8N7H5 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
PAF1Q8N7H5 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PAF1Q8N7H5 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
PAF1Q8N7H5 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PAF1Q8N7H5 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.6■■□□□ 1.37
PAF1Q8N7H5 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PAF1Q8N7H5 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.6■■□□□ 1.37
PAF1Q8N7H5 MIR4281-201ENST00000580852 62 ntBASIC23.6■■□□□ 1.37
PAF1Q8N7H5 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.6■■□□□ 1.37
PAF1Q8N7H5 AL035685.1-201ENST00000636663 812 ntBASIC23.6■■□□□ 1.37
PAF1Q8N7H5 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PAF1Q8N7H5 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
PAF1Q8N7H5 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
PAF1Q8N7H5 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
PAF1Q8N7H5 KRT125P-201ENST00000546827 989 ntBASIC23.59■■□□□ 1.37
PAF1Q8N7H5 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PAF1Q8N7H5 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PAF1Q8N7H5 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PAF1Q8N7H5 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
PAF1Q8N7H5 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms