Protein–RNA interactions for Protein: Q8N6N3

C1orf52, UPF0690 protein C1orf52, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf52Q8N6N3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
C1orf52Q8N6N3 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
C1orf52Q8N6N3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.19■■□□□ 1.14
C1orf52Q8N6N3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
C1orf52Q8N6N3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.19■■□□□ 1.14
C1orf52Q8N6N3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
C1orf52Q8N6N3 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
C1orf52Q8N6N3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
C1orf52Q8N6N3 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
C1orf52Q8N6N3 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
C1orf52Q8N6N3 AC004987.1-201ENST00000428627 508 ntBASIC22.18■■□□□ 1.14
C1orf52Q8N6N3 ATP5G2P3-201ENST00000429083 425 ntBASIC22.18■■□□□ 1.14
C1orf52Q8N6N3 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC22.18■■□□□ 1.14
C1orf52Q8N6N3 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC22.18■■□□□ 1.14
C1orf52Q8N6N3 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
C1orf52Q8N6N3 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
C1orf52Q8N6N3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
C1orf52Q8N6N3 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.18■■□□□ 1.14
C1orf52Q8N6N3 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
C1orf52Q8N6N3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
C1orf52Q8N6N3 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
C1orf52Q8N6N3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
C1orf52Q8N6N3 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
C1orf52Q8N6N3 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
C1orf52Q8N6N3 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
C1orf52Q8N6N3 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
C1orf52Q8N6N3 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
C1orf52Q8N6N3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.17■■□□□ 1.14
C1orf52Q8N6N3 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.16■■□□□ 1.14
C1orf52Q8N6N3 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
C1orf52Q8N6N3 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC22.16■■□□□ 1.14
C1orf52Q8N6N3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.16■■□□□ 1.14
C1orf52Q8N6N3 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
C1orf52Q8N6N3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.16■■□□□ 1.14
C1orf52Q8N6N3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.16■■□□□ 1.14
C1orf52Q8N6N3 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
C1orf52Q8N6N3 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.15■■□□□ 1.14
C1orf52Q8N6N3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.15■■□□□ 1.14
C1orf52Q8N6N3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
C1orf52Q8N6N3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.15■■□□□ 1.14
C1orf52Q8N6N3 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
C1orf52Q8N6N3 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
C1orf52Q8N6N3 ABCB10P4-201ENST00000566803 2184 ntBASIC22.15■■□□□ 1.14
C1orf52Q8N6N3 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
C1orf52Q8N6N3 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
C1orf52Q8N6N3 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC22.14■■□□□ 1.13
C1orf52Q8N6N3 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
C1orf52Q8N6N3 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
C1orf52Q8N6N3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
C1orf52Q8N6N3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
C1orf52Q8N6N3 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
C1orf52Q8N6N3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
C1orf52Q8N6N3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
C1orf52Q8N6N3 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
C1orf52Q8N6N3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
C1orf52Q8N6N3 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
C1orf52Q8N6N3 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
C1orf52Q8N6N3 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.13■■□□□ 1.13
C1orf52Q8N6N3 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
C1orf52Q8N6N3 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
C1orf52Q8N6N3 AC019171.1-201ENST00000601251 1056 ntBASIC22.13■■□□□ 1.13
C1orf52Q8N6N3 BHLHE23-202ENST00000612929 1109 ntBASIC22.13■■□□□ 1.13
C1orf52Q8N6N3 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
C1orf52Q8N6N3 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
C1orf52Q8N6N3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
C1orf52Q8N6N3 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.12■■□□□ 1.13
C1orf52Q8N6N3 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
C1orf52Q8N6N3 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
C1orf52Q8N6N3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.12■■□□□ 1.13
C1orf52Q8N6N3 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
C1orf52Q8N6N3 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
C1orf52Q8N6N3 MTX2-204ENST00000443241 799 ntTSL 3 BASIC22.12■■□□□ 1.13
C1orf52Q8N6N3 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
C1orf52Q8N6N3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.12■■□□□ 1.13
C1orf52Q8N6N3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.12■■□□□ 1.13
C1orf52Q8N6N3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
C1orf52Q8N6N3 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
C1orf52Q8N6N3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
C1orf52Q8N6N3 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
C1orf52Q8N6N3 TSPY13P-201ENST00000338964 914 ntBASIC22.11■■□□□ 1.13
C1orf52Q8N6N3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.11■■□□□ 1.13
C1orf52Q8N6N3 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC22.11■■□□□ 1.13
C1orf52Q8N6N3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
C1orf52Q8N6N3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.11■■□□□ 1.13
C1orf52Q8N6N3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.11■■□□□ 1.13
C1orf52Q8N6N3 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
C1orf52Q8N6N3 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
C1orf52Q8N6N3 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
C1orf52Q8N6N3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
C1orf52Q8N6N3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.1■■□□□ 1.13
C1orf52Q8N6N3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
C1orf52Q8N6N3 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
C1orf52Q8N6N3 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.1■■□□□ 1.13
C1orf52Q8N6N3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
C1orf52Q8N6N3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
C1orf52Q8N6N3 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
C1orf52Q8N6N3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
C1orf52Q8N6N3 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
C1orf52Q8N6N3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
C1orf52Q8N6N3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms