Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.83■■□□□ 1.56
DDX53Q86TM3 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
DDX53Q86TM3 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
DDX53Q86TM3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
DDX53Q86TM3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
DDX53Q86TM3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC24.82■■□□□ 1.56
DDX53Q86TM3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
DDX53Q86TM3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC24.82■■□□□ 1.56
DDX53Q86TM3 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
DDX53Q86TM3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
DDX53Q86TM3 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
DDX53Q86TM3 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC24.81■■□□□ 1.56
DDX53Q86TM3 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
DDX53Q86TM3 SRD5A1P1-201ENST00000442297 786 ntBASIC24.81■■□□□ 1.56
DDX53Q86TM3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
DDX53Q86TM3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC24.8■■□□□ 1.56
DDX53Q86TM3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC24.8■■□□□ 1.56
DDX53Q86TM3 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
DDX53Q86TM3 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
DDX53Q86TM3 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
DDX53Q86TM3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.8■■□□□ 1.56
DDX53Q86TM3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
DDX53Q86TM3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
DDX53Q86TM3 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
DDX53Q86TM3 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.78■■□□□ 1.56
DDX53Q86TM3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
DDX53Q86TM3 AL136162.1-201ENST00000607711 1078 ntBASIC24.78■■□□□ 1.56
DDX53Q86TM3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
DDX53Q86TM3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC24.78■■□□□ 1.56
DDX53Q86TM3 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
DDX53Q86TM3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
DDX53Q86TM3 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
DDX53Q86TM3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
DDX53Q86TM3 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
DDX53Q86TM3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC24.77■■□□□ 1.56
DDX53Q86TM3 AC142381.2-201ENST00000566120 298 ntBASIC24.77■■□□□ 1.56
DDX53Q86TM3 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
DDX53Q86TM3 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
DDX53Q86TM3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
DDX53Q86TM3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
DDX53Q86TM3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.76■■□□□ 1.55
DDX53Q86TM3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
DDX53Q86TM3 AL031432.3-201ENST00000607698 485 ntBASIC24.76■■□□□ 1.55
DDX53Q86TM3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
DDX53Q86TM3 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
DDX53Q86TM3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
DDX53Q86TM3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC24.75■■□□□ 1.55
DDX53Q86TM3 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
DDX53Q86TM3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
DDX53Q86TM3 AC135279.3-201ENST00000610945 1311 ntBASIC24.75■■□□□ 1.55
DDX53Q86TM3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC24.75■■□□□ 1.55
DDX53Q86TM3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC24.75■■□□□ 1.55
DDX53Q86TM3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC24.74■■□□□ 1.55
DDX53Q86TM3 ZNRF2P3-201ENST00000424200 374 ntBASIC24.74■■□□□ 1.55
DDX53Q86TM3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
DDX53Q86TM3 SUDS3P1-201ENST00000505831 966 ntBASIC24.74■■□□□ 1.55
DDX53Q86TM3 AC005703.6-201ENST00000623265 1329 ntBASIC24.74■■□□□ 1.55
DDX53Q86TM3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
DDX53Q86TM3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC24.74■■□□□ 1.55
DDX53Q86TM3 AC092803.2-201ENST00000564287 1899 ntBASIC24.73■■□□□ 1.55
DDX53Q86TM3 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC24.73■■□□□ 1.55
DDX53Q86TM3 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC24.73■■□□□ 1.55
DDX53Q86TM3 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
DDX53Q86TM3 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC24.73■■□□□ 1.55
DDX53Q86TM3 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
DDX53Q86TM3 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
DDX53Q86TM3 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.72■■□□□ 1.55
DDX53Q86TM3 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
DDX53Q86TM3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
DDX53Q86TM3 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC24.72■■□□□ 1.55
DDX53Q86TM3 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
DDX53Q86TM3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC24.72■■□□□ 1.55
DDX53Q86TM3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
DDX53Q86TM3 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
DDX53Q86TM3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.72■■□□□ 1.55
DDX53Q86TM3 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
DDX53Q86TM3 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
DDX53Q86TM3 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
DDX53Q86TM3 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
DDX53Q86TM3 EDA-201ENST00000338901 1233 ntBASIC24.71■■□□□ 1.55
DDX53Q86TM3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
DDX53Q86TM3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC24.71■■□□□ 1.55
DDX53Q86TM3 AC024257.2-201ENST00000549699 147 ntBASIC24.71■■□□□ 1.55
DDX53Q86TM3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
DDX53Q86TM3 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
DDX53Q86TM3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
DDX53Q86TM3 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
DDX53Q86TM3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC24.7■■□□□ 1.54
DDX53Q86TM3 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
DDX53Q86TM3 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
DDX53Q86TM3 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.7■■□□□ 1.54
DDX53Q86TM3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC24.7■■□□□ 1.54
DDX53Q86TM3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
DDX53Q86TM3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
DDX53Q86TM3 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC24.69■■□□□ 1.54
DDX53Q86TM3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC24.69■■□□□ 1.54
DDX53Q86TM3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
DDX53Q86TM3 AL355001.2-201ENST00000620617 1191 ntBASIC24.69■■□□□ 1.54
DDX53Q86TM3 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC24.69■■□□□ 1.54
DDX53Q86TM3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.69■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms