Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MRPL55Q7Z7F7 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
MRPL55Q7Z7F7 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MRPL55Q7Z7F7 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MRPL55Q7Z7F7 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
MRPL55Q7Z7F7 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC14.83□□□□□ -0.04
MRPL55Q7Z7F7 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
MRPL55Q7Z7F7 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
MRPL55Q7Z7F7 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MRPL55Q7Z7F7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MRPL55Q7Z7F7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC14.83□□□□□ -0.04
MRPL55Q7Z7F7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
MRPL55Q7Z7F7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MRPL55Q7Z7F7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC14.82□□□□□ -0.04
MRPL55Q7Z7F7 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MRPL55Q7Z7F7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC14.82□□□□□ -0.04
MRPL55Q7Z7F7 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MRPL55Q7Z7F7 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MRPL55Q7Z7F7 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MRPL55Q7Z7F7 AC018755.3-202ENST00000596210 929 ntBASIC14.82□□□□□ -0.04
MRPL55Q7Z7F7 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
MRPL55Q7Z7F7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
MRPL55Q7Z7F7 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC14.82□□□□□ -0.04
MRPL55Q7Z7F7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MRPL55Q7Z7F7 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MRPL55Q7Z7F7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MRPL55Q7Z7F7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MRPL55Q7Z7F7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC14.81□□□□□ -0.04
MRPL55Q7Z7F7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MRPL55Q7Z7F7 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
MRPL55Q7Z7F7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC14.81□□□□□ -0.04
MRPL55Q7Z7F7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC14.81□□□□□ -0.04
MRPL55Q7Z7F7 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MRPL55Q7Z7F7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC14.81□□□□□ -0.04
MRPL55Q7Z7F7 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
MRPL55Q7Z7F7 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MRPL55Q7Z7F7 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
MRPL55Q7Z7F7 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MRPL55Q7Z7F7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MRPL55Q7Z7F7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MRPL55Q7Z7F7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC14.81□□□□□ -0.04
MRPL55Q7Z7F7 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MRPL55Q7Z7F7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC14.8□□□□□ -0.04
MRPL55Q7Z7F7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
MRPL55Q7Z7F7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
MRPL55Q7Z7F7 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
MRPL55Q7Z7F7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MRPL55Q7Z7F7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
MRPL55Q7Z7F7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
MRPL55Q7Z7F7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MRPL55Q7Z7F7 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC14.8□□□□□ -0.04
MRPL55Q7Z7F7 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
MRPL55Q7Z7F7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MRPL55Q7Z7F7 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
MRPL55Q7Z7F7 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MRPL55Q7Z7F7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC14.79□□□□□ -0.04
MRPL55Q7Z7F7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MRPL55Q7Z7F7 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MRPL55Q7Z7F7 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
MRPL55Q7Z7F7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
MRPL55Q7Z7F7 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MRPL55Q7Z7F7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MRPL55Q7Z7F7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MRPL55Q7Z7F7 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MRPL55Q7Z7F7 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MRPL55Q7Z7F7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
MRPL55Q7Z7F7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
MRPL55Q7Z7F7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
MRPL55Q7Z7F7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
MRPL55Q7Z7F7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MRPL55Q7Z7F7 HYI-213ENST00000583037 1322 ntTSL 5 BASIC14.78□□□□□ -0.04
MRPL55Q7Z7F7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
MRPL55Q7Z7F7 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
MRPL55Q7Z7F7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
MRPL55Q7Z7F7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MRPL55Q7Z7F7 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
MRPL55Q7Z7F7 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
MRPL55Q7Z7F7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC14.77□□□□□ -0.04
MRPL55Q7Z7F7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC14.77□□□□□ -0.04
MRPL55Q7Z7F7 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
MRPL55Q7Z7F7 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
MRPL55Q7Z7F7 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
MRPL55Q7Z7F7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
MRPL55Q7Z7F7 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
MRPL55Q7Z7F7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC14.77□□□□□ -0.05
MRPL55Q7Z7F7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
MRPL55Q7Z7F7 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
MRPL55Q7Z7F7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
MRPL55Q7Z7F7 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MRPL55Q7Z7F7 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MRPL55Q7Z7F7 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC14.76□□□□□ -0.05
MRPL55Q7Z7F7 HLA-L-211ENST00000482052 1765 ntBASIC14.76□□□□□ -0.05
MRPL55Q7Z7F7 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
MRPL55Q7Z7F7 RPS2P7-201ENST00000447334 885 ntBASIC14.76□□□□□ -0.05
MRPL55Q7Z7F7 AL592293.1-201ENST00000502889 1188 ntBASIC14.76□□□□□ -0.05
MRPL55Q7Z7F7 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
MRPL55Q7Z7F7 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
MRPL55Q7Z7F7 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MRPL55Q7Z7F7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MRPL55Q7Z7F7 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms