Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.08■□□□□ 0.97
RNFT1Q5M7Z0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNFT1Q5M7Z0 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNFT1Q5M7Z0 MIR6722-201ENST00000617286 78 ntBASIC21.08■□□□□ 0.97
RNFT1Q5M7Z0 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RNFT1Q5M7Z0 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
RNFT1Q5M7Z0 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.08■□□□□ 0.96
RNFT1Q5M7Z0 DUSP8P4-201ENST00000399538 1761 ntBASIC21.08■□□□□ 0.96
RNFT1Q5M7Z0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.07■□□□□ 0.96
RNFT1Q5M7Z0 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
RNFT1Q5M7Z0 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.07■□□□□ 0.96
RNFT1Q5M7Z0 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNFT1Q5M7Z0 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.06■□□□□ 0.96
RNFT1Q5M7Z0 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNFT1Q5M7Z0 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.06■□□□□ 0.96
RNFT1Q5M7Z0 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.06■□□□□ 0.96
RNFT1Q5M7Z0 AC091060.1-201ENST00000623524 1766 ntBASIC21.06■□□□□ 0.96
RNFT1Q5M7Z0 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNFT1Q5M7Z0 AL139246.5-201ENST00000606645 996 ntBASIC21.06■□□□□ 0.96
RNFT1Q5M7Z0 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNFT1Q5M7Z0 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNFT1Q5M7Z0 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNFT1Q5M7Z0 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.06■□□□□ 0.96
RNFT1Q5M7Z0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.05■□□□□ 0.96
RNFT1Q5M7Z0 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNFT1Q5M7Z0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.05■□□□□ 0.96
RNFT1Q5M7Z0 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RNFT1Q5M7Z0 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.04■□□□□ 0.96
RNFT1Q5M7Z0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNFT1Q5M7Z0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.04■□□□□ 0.96
RNFT1Q5M7Z0 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNFT1Q5M7Z0 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNFT1Q5M7Z0 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNFT1Q5M7Z0 AC110285.6-201ENST00000617652 491 ntBASIC21.04■□□□□ 0.96
RNFT1Q5M7Z0 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNFT1Q5M7Z0 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNFT1Q5M7Z0 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNFT1Q5M7Z0 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNFT1Q5M7Z0 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNFT1Q5M7Z0 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.03■□□□□ 0.96
RNFT1Q5M7Z0 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNFT1Q5M7Z0 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.03■□□□□ 0.96
RNFT1Q5M7Z0 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNFT1Q5M7Z0 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNFT1Q5M7Z0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNFT1Q5M7Z0 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNFT1Q5M7Z0 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.03■□□□□ 0.96
RNFT1Q5M7Z0 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.03■□□□□ 0.96
RNFT1Q5M7Z0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNFT1Q5M7Z0 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNFT1Q5M7Z0 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
RNFT1Q5M7Z0 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNFT1Q5M7Z0 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNFT1Q5M7Z0 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNFT1Q5M7Z0 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNFT1Q5M7Z0 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.02■□□□□ 0.96
RNFT1Q5M7Z0 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
RNFT1Q5M7Z0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.02■□□□□ 0.95
RNFT1Q5M7Z0 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.01■□□□□ 0.95
RNFT1Q5M7Z0 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.01■□□□□ 0.95
RNFT1Q5M7Z0 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNFT1Q5M7Z0 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RNFT1Q5M7Z0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNFT1Q5M7Z0 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNFT1Q5M7Z0 AC096631.2-201ENST00000436136 790 ntBASIC21.01■□□□□ 0.95
RNFT1Q5M7Z0 AC004448.1-201ENST00000458332 883 ntBASIC21.01■□□□□ 0.95
RNFT1Q5M7Z0 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.01■□□□□ 0.95
RNFT1Q5M7Z0 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.01■□□□□ 0.95
RNFT1Q5M7Z0 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.01■□□□□ 0.95
RNFT1Q5M7Z0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNFT1Q5M7Z0 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNFT1Q5M7Z0 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
RNFT1Q5M7Z0 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNFT1Q5M7Z0 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21■□□□□ 0.95
RNFT1Q5M7Z0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNFT1Q5M7Z0 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21■□□□□ 0.95
RNFT1Q5M7Z0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21■□□□□ 0.95
RNFT1Q5M7Z0 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNFT1Q5M7Z0 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
RNFT1Q5M7Z0 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.99■□□□□ 0.95
RNFT1Q5M7Z0 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNFT1Q5M7Z0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNFT1Q5M7Z0 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RNFT1Q5M7Z0 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNFT1Q5M7Z0 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.99■□□□□ 0.95
RNFT1Q5M7Z0 AC145676.1-201ENST00000514988 2004 ntBASIC20.99■□□□□ 0.95
RNFT1Q5M7Z0 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RNFT1Q5M7Z0 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.98■□□□□ 0.95
RNFT1Q5M7Z0 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNFT1Q5M7Z0 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNFT1Q5M7Z0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.98■□□□□ 0.95
RNFT1Q5M7Z0 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.98■□□□□ 0.95
RNFT1Q5M7Z0 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNFT1Q5M7Z0 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.97■□□□□ 0.95
RNFT1Q5M7Z0 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RNFT1Q5M7Z0 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNFT1Q5M7Z0 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.97■□□□□ 0.95
RNFT1Q5M7Z0 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.97■□□□□ 0.95
RNFT1Q5M7Z0 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
RNFT1Q5M7Z0 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms