Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.2■■□□□ 1.14
GABREP78334 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
GABREP78334 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.19■■□□□ 1.14
GABREP78334 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
GABREP78334 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
GABREP78334 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.19■■□□□ 1.14
GABREP78334 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.19■■□□□ 1.14
GABREP78334 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.19■■□□□ 1.14
GABREP78334 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
GABREP78334 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
GABREP78334 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.18■■□□□ 1.14
GABREP78334 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
GABREP78334 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
GABREP78334 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
GABREP78334 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
GABREP78334 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
GABREP78334 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
GABREP78334 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
GABREP78334 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
GABREP78334 AL136967.2-201ENST00000623968 743 ntBASIC22.17■■□□□ 1.14
GABREP78334 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
GABREP78334 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
GABREP78334 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
GABREP78334 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC22.16■■□□□ 1.14
GABREP78334 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.16■■□□□ 1.14
GABREP78334 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
GABREP78334 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
GABREP78334 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.16■■□□□ 1.14
GABREP78334 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC22.16■■□□□ 1.14
GABREP78334 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
GABREP78334 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
GABREP78334 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
GABREP78334 PARL-206ENST00000435888 1098 ntTSL 5 BASIC22.15■■□□□ 1.14
GABREP78334 DUX4L19-201ENST00000557448 1267 ntBASIC22.15■■□□□ 1.14
GABREP78334 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.15■■□□□ 1.14
GABREP78334 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
GABREP78334 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.14■■□□□ 1.14
GABREP78334 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
GABREP78334 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.14■■□□□ 1.14
GABREP78334 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC22.14■■□□□ 1.13
GABREP78334 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
GABREP78334 MIR939-201ENST00000401314 82 ntBASIC22.14■■□□□ 1.13
GABREP78334 ANKRD20A6P-201ENST00000618763 204 ntBASIC22.14■■□□□ 1.13
GABREP78334 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.14■■□□□ 1.13
GABREP78334 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
GABREP78334 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC22.14■■□□□ 1.13
GABREP78334 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
GABREP78334 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.13■■□□□ 1.13
GABREP78334 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
GABREP78334 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
GABREP78334 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
GABREP78334 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC22.13■■□□□ 1.13
GABREP78334 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.13■■□□□ 1.13
GABREP78334 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.13■■□□□ 1.13
GABREP78334 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
GABREP78334 AP001330.3-201ENST00000520123 633 ntBASIC22.13■■□□□ 1.13
GABREP78334 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
GABREP78334 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
GABREP78334 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
GABREP78334 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
GABREP78334 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.12■■□□□ 1.13
GABREP78334 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC22.12■■□□□ 1.13
GABREP78334 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
GABREP78334 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
GABREP78334 AC004448.1-201ENST00000458332 883 ntBASIC22.12■■□□□ 1.13
GABREP78334 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.12■■□□□ 1.13
GABREP78334 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
GABREP78334 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
GABREP78334 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.11■■□□□ 1.13
GABREP78334 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
GABREP78334 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
GABREP78334 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
GABREP78334 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
GABREP78334 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.11■■□□□ 1.13
GABREP78334 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC22.11■■□□□ 1.13
GABREP78334 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
GABREP78334 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.1■■□□□ 1.13
GABREP78334 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
GABREP78334 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
GABREP78334 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
GABREP78334 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC22.1■■□□□ 1.13
GABREP78334 AC091305.1-201ENST00000479476 895 ntBASIC22.1■■□□□ 1.13
GABREP78334 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.1■■□□□ 1.13
GABREP78334 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
GABREP78334 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC22.1■■□□□ 1.13
GABREP78334 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.1■■□□□ 1.13
GABREP78334 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.1■■□□□ 1.13
GABREP78334 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
GABREP78334 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
GABREP78334 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
GABREP78334 SYT6-210ENST00000641643 1587 ntBASIC22.09■■□□□ 1.13
GABREP78334 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.09■■□□□ 1.13
GABREP78334 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.09■■□□□ 1.13
GABREP78334 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.09■■□□□ 1.13
GABREP78334 MIR6821-201ENST00000617625 74 ntBASIC22.09■■□□□ 1.13
GABREP78334 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.09■■□□□ 1.13
GABREP78334 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
GABREP78334 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.09■■□□□ 1.13
GABREP78334 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.09■■□□□ 1.13
GABREP78334 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 226.1 ms