Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN12P56749 AL157400.5-201ENST00000507624 621 ntBASIC20.13■□□□□ 0.81
CLDN12P56749 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN12P56749 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN12P56749 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN12P56749 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN12P56749 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN12P56749 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CLDN12P56749 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CLDN12P56749 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CLDN12P56749 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN12P56749 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN12P56749 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.12■□□□□ 0.81
CLDN12P56749 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.12■□□□□ 0.81
CLDN12P56749 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.12■□□□□ 0.81
CLDN12P56749 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN12P56749 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN12P56749 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN12P56749 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.12■□□□□ 0.81
CLDN12P56749 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN12P56749 CLDN5-201ENST00000403084 2357 ntBASIC20.12■□□□□ 0.81
CLDN12P56749 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN12P56749 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN12P56749 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CLDN12P56749 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN12P56749 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN12P56749 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
CLDN12P56749 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN12P56749 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CLDN12P56749 AC025884.2-201ENST00000553429 711 ntBASIC20.1■□□□□ 0.81
CLDN12P56749 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CLDN12P56749 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN12P56749 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.1■□□□□ 0.81
CLDN12P56749 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN12P56749 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN12P56749 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN12P56749 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN12P56749 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN12P56749 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.09■□□□□ 0.81
CLDN12P56749 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN12P56749 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
CLDN12P56749 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN12P56749 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.09■□□□□ 0.81
CLDN12P56749 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN12P56749 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN12P56749 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.09■□□□□ 0.81
CLDN12P56749 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN12P56749 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN12P56749 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.08■□□□□ 0.81
CLDN12P56749 MIR3960-201ENST00000583311 91 ntBASIC20.08■□□□□ 0.81
CLDN12P56749 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLDN12P56749 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLDN12P56749 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CLDN12P56749 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
CLDN12P56749 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CLDN12P56749 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.08■□□□□ 0.8
CLDN12P56749 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLDN12P56749 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.08■□□□□ 0.8
CLDN12P56749 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN12P56749 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN12P56749 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.07■□□□□ 0.8
CLDN12P56749 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN12P56749 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN12P56749 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CLDN12P56749 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.06■□□□□ 0.8
CLDN12P56749 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN12P56749 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN12P56749 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.06■□□□□ 0.8
CLDN12P56749 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN12P56749 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN12P56749 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN12P56749 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN12P56749 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN12P56749 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN12P56749 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN12P56749 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN12P56749 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.05■□□□□ 0.8
CLDN12P56749 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN12P56749 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN12P56749 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN12P56749 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.05■□□□□ 0.8
CLDN12P56749 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.05■□□□□ 0.8
CLDN12P56749 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.05■□□□□ 0.8
CLDN12P56749 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN12P56749 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CLDN12P56749 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN12P56749 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.04■□□□□ 0.8
CLDN12P56749 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN12P56749 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.04■□□□□ 0.8
CLDN12P56749 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN12P56749 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN12P56749 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN12P56749 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN12P56749 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN12P56749 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN12P56749 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.03■□□□□ 0.8
CLDN12P56749 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.03■□□□□ 0.8
CLDN12P56749 AL117328.2-201ENST00000624617 1940 ntBASIC20.03■□□□□ 0.8
CLDN12P56749 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CLDN12P56749 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms