Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.5■■□□□ 1.03
RNF144AP50876 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RNF144AP50876 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.5■■□□□ 1.03
RNF144AP50876 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.5■■□□□ 1.03
RNF144AP50876 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF144AP50876 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RNF144AP50876 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
RNF144AP50876 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF144AP50876 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF144AP50876 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF144AP50876 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
RNF144AP50876 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF144AP50876 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
RNF144AP50876 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.49■■□□□ 1.03
RNF144AP50876 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.49■■□□□ 1.03
RNF144AP50876 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.49■■□□□ 1.03
RNF144AP50876 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RNF144AP50876 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RNF144AP50876 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF144AP50876 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RNF144AP50876 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
RNF144AP50876 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF144AP50876 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.48■■□□□ 1.03
RNF144AP50876 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.48■■□□□ 1.03
RNF144AP50876 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
RNF144AP50876 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF144AP50876 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
RNF144AP50876 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RNF144AP50876 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF144AP50876 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.48■■□□□ 1.03
RNF144AP50876 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.48■■□□□ 1.03
RNF144AP50876 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF144AP50876 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RNF144AP50876 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF144AP50876 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF144AP50876 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF144AP50876 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF144AP50876 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RNF144AP50876 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.47■■□□□ 1.03
RNF144AP50876 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF144AP50876 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.46■■□□□ 1.03
RNF144AP50876 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.46■■□□□ 1.03
RNF144AP50876 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.46■■□□□ 1.03
RNF144AP50876 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF144AP50876 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RNF144AP50876 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF144AP50876 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.46■■□□□ 1.03
RNF144AP50876 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.46■■□□□ 1.03
RNF144AP50876 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF144AP50876 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF144AP50876 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF144AP50876 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.46■■□□□ 1.03
RNF144AP50876 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.46■■□□□ 1.03
RNF144AP50876 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
RNF144AP50876 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF144AP50876 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RNF144AP50876 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF144AP50876 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RNF144AP50876 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.45■■□□□ 1.02
RNF144AP50876 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF144AP50876 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF144AP50876 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
RNF144AP50876 AL592295.1-201ENST00000400984 884 ntBASIC21.45■■□□□ 1.02
RNF144AP50876 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.45■■□□□ 1.02
RNF144AP50876 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RNF144AP50876 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
RNF144AP50876 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF144AP50876 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF144AP50876 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF144AP50876 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RNF144AP50876 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.44■■□□□ 1.02
RNF144AP50876 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.44■■□□□ 1.02
RNF144AP50876 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF144AP50876 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
RNF144AP50876 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.44■■□□□ 1.02
RNF144AP50876 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
RNF144AP50876 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.44■■□□□ 1.02
RNF144AP50876 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RNF144AP50876 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF144AP50876 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.43■■□□□ 1.02
RNF144AP50876 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RNF144AP50876 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RNF144AP50876 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
RNF144AP50876 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.43■■□□□ 1.02
RNF144AP50876 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF144AP50876 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RNF144AP50876 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RNF144AP50876 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF144AP50876 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF144AP50876 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF144AP50876 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RNF144AP50876 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
RNF144AP50876 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF144AP50876 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RNF144AP50876 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF144AP50876 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF144AP50876 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
RNF144AP50876 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF144AP50876 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RNF144AP50876 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms