Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBCP0CG48 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBCP0CG48 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBCP0CG48 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
UBCP0CG48 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBCP0CG48 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBCP0CG48 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
UBCP0CG48 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
UBCP0CG48 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBCP0CG48 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
UBCP0CG48 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
UBCP0CG48 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
UBCP0CG48 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBCP0CG48 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBCP0CG48 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBCP0CG48 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UBCP0CG48 ABCB10P4-201ENST00000566803 2184 ntBASIC20.27■□□□□ 0.84
UBCP0CG48 AC068473.5-201ENST00000616428 2072 ntBASIC20.27■□□□□ 0.84
UBCP0CG48 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBCP0CG48 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBCP0CG48 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBCP0CG48 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBCP0CG48 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.27■□□□□ 0.84
UBCP0CG48 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
UBCP0CG48 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
UBCP0CG48 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
UBCP0CG48 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.26■□□□□ 0.83
UBCP0CG48 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBCP0CG48 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBCP0CG48 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBCP0CG48 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBCP0CG48 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBCP0CG48 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.25■□□□□ 0.83
UBCP0CG48 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.25■□□□□ 0.83
UBCP0CG48 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UBCP0CG48 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
UBCP0CG48 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.25■□□□□ 0.83
UBCP0CG48 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
UBCP0CG48 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
UBCP0CG48 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBCP0CG48 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBCP0CG48 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBCP0CG48 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBCP0CG48 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBCP0CG48 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBCP0CG48 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBCP0CG48 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBCP0CG48 DUSP8P5-201ENST00000422884 1815 ntBASIC20.24■□□□□ 0.83
UBCP0CG48 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBCP0CG48 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.24■□□□□ 0.83
UBCP0CG48 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
UBCP0CG48 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UBCP0CG48 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBCP0CG48 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBCP0CG48 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UBCP0CG48 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.23■□□□□ 0.83
UBCP0CG48 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
UBCP0CG48 AC009831.1-201ENST00000580420 1582 ntBASIC20.23■□□□□ 0.83
UBCP0CG48 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBCP0CG48 CLDN5-201ENST00000403084 2357 ntBASIC20.23■□□□□ 0.83
UBCP0CG48 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
UBCP0CG48 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UBCP0CG48 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBCP0CG48 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
UBCP0CG48 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBCP0CG48 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBCP0CG48 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.22■□□□□ 0.83
UBCP0CG48 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
UBCP0CG48 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBCP0CG48 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.22■□□□□ 0.83
UBCP0CG48 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBCP0CG48 AC133552.2-201ENST00000619106 1032 ntBASIC20.21■□□□□ 0.83
UBCP0CG48 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.21■□□□□ 0.83
UBCP0CG48 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UBCP0CG48 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.21■□□□□ 0.83
UBCP0CG48 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBCP0CG48 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.21■□□□□ 0.83
UBCP0CG48 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBCP0CG48 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBCP0CG48 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBCP0CG48 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.2■□□□□ 0.82
UBCP0CG48 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBCP0CG48 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBCP0CG48 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
UBCP0CG48 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
UBCP0CG48 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBCP0CG48 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBCP0CG48 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBCP0CG48 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBCP0CG48 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UBCP0CG48 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBCP0CG48 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
UBCP0CG48 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
UBCP0CG48 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.19■□□□□ 0.82
UBCP0CG48 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBCP0CG48 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBCP0CG48 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
UBCP0CG48 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.18■□□□□ 0.82
UBCP0CG48 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UBCP0CG48 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms