Protein–RNA interactions for Protein: P05388

RPLP0, 60S acidic ribosomal protein P0, humanhuman

Known RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPLP0P05388 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22.7■■□□□ 1.22
RPLP0P05388 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RPLP0P05388 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.69■■□□□ 1.22
RPLP0P05388 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RPLP0P05388 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
RPLP0P05388 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RPLP0P05388 AF131216.4-201ENST00000638924 1588 ntBASIC22.69■■□□□ 1.22
RPLP0P05388 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.69■■□□□ 1.22
RPLP0P05388 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.68■■□□□ 1.22
RPLP0P05388 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RPLP0P05388 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RPLP0P05388 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RPLP0P05388 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RPLP0P05388 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.68■■□□□ 1.22
RPLP0P05388 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.68■■□□□ 1.22
RPLP0P05388 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
RPLP0P05388 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RPLP0P05388 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.67■■□□□ 1.22
RPLP0P05388 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.67■■□□□ 1.22
RPLP0P05388 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
RPLP0P05388 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.67■■□□□ 1.22
RPLP0P05388 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.67■■□□□ 1.22
RPLP0P05388 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.67■■□□□ 1.22
RPLP0P05388 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.67■■□□□ 1.22
RPLP0P05388 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
RPLP0P05388 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RPLP0P05388 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.66■■□□□ 1.22
RPLP0P05388 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RPLP0P05388 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RPLP0P05388 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.66■■□□□ 1.22
RPLP0P05388 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RPLP0P05388 AL139246.5-201ENST00000606645 996 ntBASIC22.66■■□□□ 1.22
RPLP0P05388 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.66■■□□□ 1.22
RPLP0P05388 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RPLP0P05388 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RPLP0P05388 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RPLP0P05388 AC093323.1-202ENST00000635031 2045 ntBASIC22.65■■□□□ 1.22
RPLP0P05388 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
RPLP0P05388 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RPLP0P05388 MIR638-201ENST00000385237 100 ntBASIC22.65■■□□□ 1.22
RPLP0P05388 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RPLP0P05388 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.65■■□□□ 1.22
RPLP0P05388 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.65■■□□□ 1.22
RPLP0P05388 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
RPLP0P05388 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RPLP0P05388 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RPLP0P05388 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.65■■□□□ 1.22
RPLP0P05388 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
RPLP0P05388 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
RPLP0P05388 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.64■■□□□ 1.21
RPLP0P05388 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
RPLP0P05388 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
RPLP0P05388 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RPLP0P05388 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
RPLP0P05388 ERN1-208ENST00000606895 2068 ntBASIC22.64■■□□□ 1.21
RPLP0P05388 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
RPLP0P05388 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RPLP0P05388 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RPLP0P05388 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.63■■□□□ 1.21
RPLP0P05388 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.63■■□□□ 1.21
RPLP0P05388 MIR935-201ENST00000401179 91 ntBASIC22.63■■□□□ 1.21
RPLP0P05388 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC22.63■■□□□ 1.21
RPLP0P05388 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RPLP0P05388 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.63■■□□□ 1.21
RPLP0P05388 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RPLP0P05388 AC090877.2-201ENST00000558441 1738 ntBASIC22.62■■□□□ 1.21
RPLP0P05388 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RPLP0P05388 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
RPLP0P05388 AC096887.2-201ENST00000623443 1957 ntBASIC22.62■■□□□ 1.21
RPLP0P05388 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RPLP0P05388 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RPLP0P05388 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RPLP0P05388 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
RPLP0P05388 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RPLP0P05388 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RPLP0P05388 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RPLP0P05388 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RPLP0P05388 AC097639.1-201ENST00000565519 1891 ntBASIC22.61■■□□□ 1.21
RPLP0P05388 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RPLP0P05388 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
RPLP0P05388 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.6■■□□□ 1.21
RPLP0P05388 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.6■■□□□ 1.21
RPLP0P05388 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RPLP0P05388 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.6■■□□□ 1.21
RPLP0P05388 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.6■■□□□ 1.21
RPLP0P05388 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.6■■□□□ 1.21
RPLP0P05388 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
RPLP0P05388 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RPLP0P05388 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RPLP0P05388 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RPLP0P05388 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RPLP0P05388 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
RPLP0P05388 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RPLP0P05388 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RPLP0P05388 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RPLP0P05388 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC22.59■■□□□ 1.21
RPLP0P05388 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.59■■□□□ 1.21
RPLP0P05388 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.59■■□□□ 1.21
RPLP0P05388 MIR4466-201ENST00000606121 54 ntBASIC22.59■■□□□ 1.21
RPLP0P05388 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms