Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.76■□□□□ 0.91
HLA-DPB1P04440 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-DPB1P04440 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.76■□□□□ 0.91
HLA-DPB1P04440 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-DPB1P04440 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-DPB1P04440 ABCB10P4-201ENST00000566803 2184 ntBASIC20.76■□□□□ 0.91
HLA-DPB1P04440 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-DPB1P04440 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-DPB1P04440 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-DPB1P04440 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-DPB1P04440 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.75■□□□□ 0.91
HLA-DPB1P04440 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-DPB1P04440 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-DPB1P04440 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.75■□□□□ 0.91
HLA-DPB1P04440 MIR3960-201ENST00000583311 91 ntBASIC20.75■□□□□ 0.91
HLA-DPB1P04440 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
HLA-DPB1P04440 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-DPB1P04440 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.74■□□□□ 0.91
HLA-DPB1P04440 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DPB1P04440 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.74■□□□□ 0.91
HLA-DPB1P04440 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.74■□□□□ 0.91
HLA-DPB1P04440 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DPB1P04440 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DPB1P04440 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DPB1P04440 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
HLA-DPB1P04440 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.73■□□□□ 0.91
HLA-DPB1P04440 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DPB1P04440 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DPB1P04440 RARRES2P2-201ENST00000394842 485 ntBASIC20.73■□□□□ 0.91
HLA-DPB1P04440 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.73■□□□□ 0.91
HLA-DPB1P04440 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DPB1P04440 AC007029.1-201ENST00000604183 313 ntBASIC20.73■□□□□ 0.91
HLA-DPB1P04440 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.73■□□□□ 0.91
HLA-DPB1P04440 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DPB1P04440 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DPB1P04440 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.73■□□□□ 0.91
HLA-DPB1P04440 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DPB1P04440 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DPB1P04440 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DPB1P04440 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DPB1P04440 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DPB1P04440 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
HLA-DPB1P04440 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
HLA-DPB1P04440 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DPB1P04440 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DPB1P04440 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DPB1P04440 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DPB1P04440 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DPB1P04440 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.72■□□□□ 0.91
HLA-DPB1P04440 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DPB1P04440 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.72■□□□□ 0.91
HLA-DPB1P04440 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
HLA-DPB1P04440 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-DPB1P04440 RP9P-202ENST00000450133 1212 ntBASIC20.71■□□□□ 0.91
HLA-DPB1P04440 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-DPB1P04440 MIR6089-201ENST00000616698 64 ntBASIC20.71■□□□□ 0.91
HLA-DPB1P04440 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-DPB1P04440 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.71■□□□□ 0.91
HLA-DPB1P04440 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.71■□□□□ 0.91
HLA-DPB1P04440 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HLA-DPB1P04440 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HLA-DPB1P04440 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HLA-DPB1P04440 AC093536.1-201ENST00000569153 554 ntBASIC20.7■□□□□ 0.9
HLA-DPB1P04440 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HLA-DPB1P04440 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
HLA-DPB1P04440 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
HLA-DPB1P04440 CLDN5-201ENST00000403084 2357 ntBASIC20.7■□□□□ 0.9
HLA-DPB1P04440 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
HLA-DPB1P04440 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-DPB1P04440 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.69■□□□□ 0.9
HLA-DPB1P04440 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.69■□□□□ 0.9
HLA-DPB1P04440 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-DPB1P04440 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-DPB1P04440 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-DPB1P04440 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
HLA-DPB1P04440 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-DPB1P04440 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DPB1P04440 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
HLA-DPB1P04440 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DPB1P04440 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DPB1P04440 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DPB1P04440 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DPB1P04440 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DPB1P04440 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DPB1P04440 C9orf163-202ENST00000624034 2573 ntBASIC20.68■□□□□ 0.9
HLA-DPB1P04440 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
HLA-DPB1P04440 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DPB1P04440 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.67■□□□□ 0.9
HLA-DPB1P04440 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-DPB1P04440 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
HLA-DPB1P04440 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-DPB1P04440 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
HLA-DPB1P04440 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-DPB1P04440 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-DPB1P04440 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
HLA-DPB1P04440 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-DPB1P04440 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DPB1P04440 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
HLA-DPB1P04440 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DPB1P04440 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms