Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TGFAP01135 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.14■□□□□ 0.65
TGFAP01135 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.14■□□□□ 0.65
TGFAP01135 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.14■□□□□ 0.65
TGFAP01135 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.14■□□□□ 0.65
TGFAP01135 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TGFAP01135 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TGFAP01135 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TGFAP01135 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TGFAP01135 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.13■□□□□ 0.65
TGFAP01135 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TGFAP01135 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
TGFAP01135 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TGFAP01135 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TGFAP01135 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TGFAP01135 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.13■□□□□ 0.65
TGFAP01135 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
TGFAP01135 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TGFAP01135 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TGFAP01135 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TGFAP01135 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TGFAP01135 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TGFAP01135 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC19.12■□□□□ 0.65
TGFAP01135 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TGFAP01135 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TGFAP01135 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.12■□□□□ 0.65
TGFAP01135 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.12■□□□□ 0.65
TGFAP01135 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TGFAP01135 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TGFAP01135 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TGFAP01135 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
TGFAP01135 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.11■□□□□ 0.65
TGFAP01135 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TGFAP01135 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TGFAP01135 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.11■□□□□ 0.65
TGFAP01135 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.11■□□□□ 0.65
TGFAP01135 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TGFAP01135 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TGFAP01135 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TGFAP01135 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TGFAP01135 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TGFAP01135 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TGFAP01135 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TGFAP01135 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TGFAP01135 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TGFAP01135 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.1■□□□□ 0.65
TGFAP01135 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.1■□□□□ 0.65
TGFAP01135 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TGFAP01135 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TGFAP01135 AC004448.1-201ENST00000458332 883 ntBASIC19.1■□□□□ 0.65
TGFAP01135 AC024257.2-201ENST00000549699 147 ntBASIC19.1■□□□□ 0.65
TGFAP01135 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.1■□□□□ 0.65
TGFAP01135 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TGFAP01135 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TGFAP01135 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.1■□□□□ 0.65
TGFAP01135 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.09■□□□□ 0.65
TGFAP01135 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TGFAP01135 AC005703.6-201ENST00000623265 1329 ntBASIC19.09■□□□□ 0.65
TGFAP01135 EDA-201ENST00000338901 1233 ntBASIC19.09■□□□□ 0.65
TGFAP01135 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TGFAP01135 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TGFAP01135 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TGFAP01135 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.09■□□□□ 0.65
TGFAP01135 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TGFAP01135 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.09■□□□□ 0.65
TGFAP01135 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TGFAP01135 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TGFAP01135 SUDS3P1-201ENST00000505831 966 ntBASIC19.09■□□□□ 0.65
TGFAP01135 RARRES2P6-201ENST00000567333 442 ntBASIC19.09■□□□□ 0.65
TGFAP01135 AL355001.2-201ENST00000620617 1191 ntBASIC19.09■□□□□ 0.65
TGFAP01135 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.09■□□□□ 0.65
TGFAP01135 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.09■□□□□ 0.65
TGFAP01135 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TGFAP01135 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
TGFAP01135 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.08■□□□□ 0.65
TGFAP01135 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
TGFAP01135 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TGFAP01135 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.08■□□□□ 0.64
TGFAP01135 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.08■□□□□ 0.64
TGFAP01135 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.08■□□□□ 0.64
TGFAP01135 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TGFAP01135 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TGFAP01135 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
TGFAP01135 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TGFAP01135 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TGFAP01135 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TGFAP01135 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TGFAP01135 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.07■□□□□ 0.64
TGFAP01135 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.07■□□□□ 0.64
TGFAP01135 AL031432.3-201ENST00000607698 485 ntBASIC19.07■□□□□ 0.64
TGFAP01135 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TGFAP01135 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TGFAP01135 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TGFAP01135 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.07■□□□□ 0.64
TGFAP01135 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TGFAP01135 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TGFAP01135 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TGFAP01135 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.06■□□□□ 0.64
TGFAP01135 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.06■□□□□ 0.64
TGFAP01135 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms