Protein–RNA interactions for Protein: O95551

TDP2, Tyrosyl-DNA phosphodiesterase 2, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2O95551 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC26.39■■□□□ 1.82
TDP2O95551 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC26.39■■□□□ 1.82
TDP2O95551 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC26.39■■□□□ 1.82
TDP2O95551 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC26.38■■□□□ 1.81
TDP2O95551 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
TDP2O95551 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.38■■□□□ 1.81
TDP2O95551 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
TDP2O95551 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
TDP2O95551 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
TDP2O95551 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
TDP2O95551 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TDP2O95551 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC26.37■■□□□ 1.81
TDP2O95551 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TDP2O95551 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
TDP2O95551 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
TDP2O95551 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC26.37■■□□□ 1.81
TDP2O95551 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC26.37■■□□□ 1.81
TDP2O95551 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC26.37■■□□□ 1.81
TDP2O95551 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TDP2O95551 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TDP2O95551 TMEM202-AS1-202ENST00000565181 2325 ntBASIC26.37■■□□□ 1.81
TDP2O95551 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TDP2O95551 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
TDP2O95551 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.36■■□□□ 1.81
TDP2O95551 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
TDP2O95551 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
TDP2O95551 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TDP2O95551 AC239859.2-201ENST00000444165 318 ntBASIC26.35■■□□□ 1.81
TDP2O95551 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26.35■■□□□ 1.81
TDP2O95551 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC26.35■■□□□ 1.81
TDP2O95551 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TDP2O95551 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TDP2O95551 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC26.34■■□□□ 1.81
TDP2O95551 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
TDP2O95551 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TDP2O95551 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
TDP2O95551 BX664725.1-201ENST00000438252 379 ntBASIC26.34■■□□□ 1.81
TDP2O95551 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
TDP2O95551 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
TDP2O95551 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
TDP2O95551 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TDP2O95551 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
TDP2O95551 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
TDP2O95551 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
TDP2O95551 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.8
TDP2O95551 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.32■■□□□ 1.8
TDP2O95551 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TDP2O95551 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TDP2O95551 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC26.32■■□□□ 1.8
TDP2O95551 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TDP2O95551 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.32■■□□□ 1.8
TDP2O95551 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC26.32■■□□□ 1.8
TDP2O95551 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
TDP2O95551 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
TDP2O95551 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TDP2O95551 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
TDP2O95551 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
TDP2O95551 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
TDP2O95551 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
TDP2O95551 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC26.32■■□□□ 1.8
TDP2O95551 AC021242.3-201ENST00000607598 1377 ntBASIC26.32■■□□□ 1.8
TDP2O95551 AL139125.2-201ENST00000623134 1869 ntBASIC26.32■■□□□ 1.8
TDP2O95551 OR2A1-AS1-204ENST00000470435 602 ntBASIC26.31■■□□□ 1.8
TDP2O95551 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC26.31■■□□□ 1.8
TDP2O95551 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC26.31■■□□□ 1.8
TDP2O95551 Z92544.1-202ENST00000571933 1220 ntBASIC26.31■■□□□ 1.8
TDP2O95551 TRIR-205ENST00000592273 783 ntTSL 3 BASIC26.31■■□□□ 1.8
TDP2O95551 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC26.31■■□□□ 1.8
TDP2O95551 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TDP2O95551 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TDP2O95551 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TDP2O95551 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
TDP2O95551 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC26.3■■□□□ 1.8
TDP2O95551 EED-207ENST00000528180 1745 ntTSL 5 BASIC26.29■■□□□ 1.8
TDP2O95551 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC26.29■■□□□ 1.8
TDP2O95551 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
TDP2O95551 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
TDP2O95551 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
TDP2O95551 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC26.29■■□□□ 1.8
TDP2O95551 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC26.28■■□□□ 1.8
TDP2O95551 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC26.28■■□□□ 1.8
TDP2O95551 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
TDP2O95551 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26.28■■□□□ 1.8
TDP2O95551 LBH-205ENST00000407930 756 ntTSL 2 BASIC26.27■■□□□ 1.8
TDP2O95551 HES6-204ENST00000409182 863 ntTSL 2 BASIC26.27■■□□□ 1.8
TDP2O95551 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC26.27■■□□□ 1.8
TDP2O95551 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
TDP2O95551 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC26.27■■□□□ 1.8
TDP2O95551 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TDP2O95551 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TDP2O95551 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TDP2O95551 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
TDP2O95551 AC131274.2-201ENST00000580697 1507 ntBASIC26.26■■□□□ 1.79
TDP2O95551 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC26.26■■□□□ 1.79
TDP2O95551 KRT125P-201ENST00000546827 989 ntBASIC26.26■■□□□ 1.79
TDP2O95551 MIR4787-201ENST00000607364 84 ntBASIC26.26■■□□□ 1.79
TDP2O95551 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
TDP2O95551 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TDP2O95551 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
TDP2O95551 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms