Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.96■□□□□ 0.95
CLPXO76031 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLPXO76031 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.96■□□□□ 0.95
CLPXO76031 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
CLPXO76031 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CLPXO76031 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CLPXO76031 MIR3648-2-201ENST00000581792 180 ntBASIC20.95■□□□□ 0.94
CLPXO76031 MIR3648-1-201ENST00000615959 180 ntBASIC20.95■□□□□ 0.94
CLPXO76031 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CLPXO76031 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLPXO76031 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLPXO76031 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.95■□□□□ 0.94
CLPXO76031 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLPXO76031 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CLPXO76031 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLPXO76031 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLPXO76031 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLPXO76031 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLPXO76031 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.94■□□□□ 0.94
CLPXO76031 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLPXO76031 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLPXO76031 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLPXO76031 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLPXO76031 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLPXO76031 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.93■□□□□ 0.94
CLPXO76031 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLPXO76031 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CLPXO76031 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.93■□□□□ 0.94
CLPXO76031 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.93■□□□□ 0.94
CLPXO76031 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.93■□□□□ 0.94
CLPXO76031 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.93■□□□□ 0.94
CLPXO76031 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLPXO76031 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.93■□□□□ 0.94
CLPXO76031 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.92■□□□□ 0.94
CLPXO76031 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLPXO76031 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLPXO76031 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLPXO76031 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.92■□□□□ 0.94
CLPXO76031 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLPXO76031 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.92■□□□□ 0.94
CLPXO76031 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLPXO76031 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLPXO76031 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLPXO76031 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.91■□□□□ 0.94
CLPXO76031 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.91■□□□□ 0.94
CLPXO76031 AC016575.1-201ENST00000607026 382 ntBASIC20.91■□□□□ 0.94
CLPXO76031 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.91■□□□□ 0.94
CLPXO76031 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLPXO76031 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLPXO76031 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLPXO76031 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLPXO76031 DUX4L11-201ENST00000611504 1267 ntBASIC20.9■□□□□ 0.94
CLPXO76031 DUX4L12-201ENST00000614593 1267 ntBASIC20.9■□□□□ 0.94
CLPXO76031 DUX4L14-201ENST00000621227 1267 ntBASIC20.9■□□□□ 0.94
CLPXO76031 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLPXO76031 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.9■□□□□ 0.94
CLPXO76031 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CLPXO76031 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.89■□□□□ 0.94
CLPXO76031 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CLPXO76031 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLPXO76031 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CLPXO76031 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.89■□□□□ 0.93
CLPXO76031 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.89■□□□□ 0.93
CLPXO76031 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLPXO76031 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLPXO76031 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLPXO76031 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
CLPXO76031 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLPXO76031 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLPXO76031 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLPXO76031 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLPXO76031 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLPXO76031 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLPXO76031 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.88■□□□□ 0.93
CLPXO76031 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLPXO76031 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CLPXO76031 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLPXO76031 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLPXO76031 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLPXO76031 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CLPXO76031 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.87■□□□□ 0.93
CLPXO76031 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CLPXO76031 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLPXO76031 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLPXO76031 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.87■□□□□ 0.93
CLPXO76031 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLPXO76031 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLPXO76031 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLPXO76031 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLPXO76031 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CLPXO76031 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.86■□□□□ 0.93
CLPXO76031 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLPXO76031 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLPXO76031 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.86■□□□□ 0.93
CLPXO76031 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.86■□□□□ 0.93
CLPXO76031 AC110285.7-201ENST00000624417 1536 ntBASIC20.86■□□□□ 0.93
CLPXO76031 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CLPXO76031 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CLPXO76031 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLPXO76031 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms