Protein–RNA interactions for Protein: O75569

PRKRA, Interferon-inducible double-stranded RNA-dependent protein kinase activator A, humanhuman

Known RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKRAO75569 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PRKRAO75569 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
PRKRAO75569 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PRKRAO75569 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
PRKRAO75569 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PRKRAO75569 AC022616.5-201ENST00000518796 181 ntBASIC21.99■■□□□ 1.11
PRKRAO75569 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.99■■□□□ 1.11
PRKRAO75569 MIR4508-201ENST00000584178 70 ntBASIC21.99■■□□□ 1.11
PRKRAO75569 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
PRKRAO75569 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PRKRAO75569 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.99■■□□□ 1.11
PRKRAO75569 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PRKRAO75569 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.99■■□□□ 1.11
PRKRAO75569 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PRKRAO75569 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PRKRAO75569 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PRKRAO75569 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PRKRAO75569 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.98■■□□□ 1.11
PRKRAO75569 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PRKRAO75569 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.97■■□□□ 1.11
PRKRAO75569 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
PRKRAO75569 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.97■■□□□ 1.11
PRKRAO75569 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.97■■□□□ 1.11
PRKRAO75569 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.97■■□□□ 1.11
PRKRAO75569 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PRKRAO75569 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PRKRAO75569 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PRKRAO75569 AC103724.3-201ENST00000564481 992 ntBASIC21.96■■□□□ 1.11
PRKRAO75569 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PRKRAO75569 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.96■■□□□ 1.11
PRKRAO75569 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PRKRAO75569 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.95■■□□□ 1.1
PRKRAO75569 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PRKRAO75569 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
PRKRAO75569 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
PRKRAO75569 YBX1P4-201ENST00000392794 808 ntBASIC21.95■■□□□ 1.1
PRKRAO75569 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.95■■□□□ 1.1
PRKRAO75569 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PRKRAO75569 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.95■■□□□ 1.1
PRKRAO75569 AC011551.1-201ENST00000614101 683 ntBASIC21.95■■□□□ 1.1
PRKRAO75569 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.95■■□□□ 1.1
PRKRAO75569 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.95■■□□□ 1.1
PRKRAO75569 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
PRKRAO75569 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PRKRAO75569 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PRKRAO75569 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PRKRAO75569 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PRKRAO75569 RARRES2P1-201ENST00000474487 481 ntBASIC21.94■■□□□ 1.1
PRKRAO75569 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PRKRAO75569 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PRKRAO75569 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PRKRAO75569 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PRKRAO75569 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PRKRAO75569 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PRKRAO75569 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PRKRAO75569 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.93■■□□□ 1.1
PRKRAO75569 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.93■■□□□ 1.1
PRKRAO75569 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.93■■□□□ 1.1
PRKRAO75569 THA1P-201ENST00000590384 1145 ntBASIC21.93■■□□□ 1.1
PRKRAO75569 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.93■■□□□ 1.1
PRKRAO75569 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
PRKRAO75569 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PRKRAO75569 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PRKRAO75569 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.92■■□□□ 1.1
PRKRAO75569 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PRKRAO75569 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PRKRAO75569 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
PRKRAO75569 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PRKRAO75569 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PRKRAO75569 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.92■■□□□ 1.1
PRKRAO75569 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.92■■□□□ 1.1
PRKRAO75569 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
PRKRAO75569 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.9■■□□□ 1.1
PRKRAO75569 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.9■■□□□ 1.1
PRKRAO75569 LINC00543-201ENST00000567234 1845 ntBASIC21.9■■□□□ 1.1
PRKRAO75569 KRT18P24-201ENST00000344739 1156 ntBASIC21.9■■□□□ 1.1
PRKRAO75569 MIR4281-201ENST00000580852 62 ntBASIC21.9■■□□□ 1.1
PRKRAO75569 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PRKRAO75569 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PRKRAO75569 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.9■■□□□ 1.1
PRKRAO75569 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PRKRAO75569 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PRKRAO75569 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PRKRAO75569 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
PRKRAO75569 AC004812.2-201ENST00000611079 2094 ntBASIC21.89■■□□□ 1.09
PRKRAO75569 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PRKRAO75569 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PRKRAO75569 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PRKRAO75569 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PRKRAO75569 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.88■■□□□ 1.09
PRKRAO75569 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.88■■□□□ 1.09
PRKRAO75569 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PRKRAO75569 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PRKRAO75569 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.87■■□□□ 1.09
PRKRAO75569 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PRKRAO75569 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.87■■□□□ 1.09
PRKRAO75569 AL031848.2-201ENST00000607670 837 ntBASIC21.87■■□□□ 1.09
PRKRAO75569 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PRKRAO75569 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.87■■□□□ 1.09
PRKRAO75569 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms