Protein–RNA interactions for Protein: O75525

KHDRBS3, KH domain-containing, RNA-binding, signal transduction-associated protein 3, humanhuman

Known RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDRBS3O75525 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
KHDRBS3O75525 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
KHDRBS3O75525 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KHDRBS3O75525 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
KHDRBS3O75525 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
KHDRBS3O75525 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.8■□□□□ 0.92
KHDRBS3O75525 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
KHDRBS3O75525 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KHDRBS3O75525 SPCS2P3-201ENST00000500401 656 ntBASIC20.79■□□□□ 0.92
KHDRBS3O75525 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
KHDRBS3O75525 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
KHDRBS3O75525 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KHDRBS3O75525 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KHDRBS3O75525 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KHDRBS3O75525 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.78■□□□□ 0.92
KHDRBS3O75525 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KHDRBS3O75525 AC141586.4-201ENST00000624558 1573 ntBASIC20.78■□□□□ 0.92
KHDRBS3O75525 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.78■□□□□ 0.92
KHDRBS3O75525 MIR6765-201ENST00000614092 87 ntBASIC20.78■□□□□ 0.92
KHDRBS3O75525 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.78■□□□□ 0.92
KHDRBS3O75525 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KHDRBS3O75525 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.77■□□□□ 0.92
KHDRBS3O75525 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
KHDRBS3O75525 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.77■□□□□ 0.92
KHDRBS3O75525 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
KHDRBS3O75525 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.77■□□□□ 0.91
KHDRBS3O75525 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.76■□□□□ 0.91
KHDRBS3O75525 LINC00543-201ENST00000567234 1845 ntBASIC20.76■□□□□ 0.91
KHDRBS3O75525 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KHDRBS3O75525 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KHDRBS3O75525 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.76■□□□□ 0.91
KHDRBS3O75525 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KHDRBS3O75525 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.76■□□□□ 0.91
KHDRBS3O75525 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
KHDRBS3O75525 U85056.1-201ENST00000616429 682 ntBASIC20.76■□□□□ 0.91
KHDRBS3O75525 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KHDRBS3O75525 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KHDRBS3O75525 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
KHDRBS3O75525 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KHDRBS3O75525 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KHDRBS3O75525 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.76■□□□□ 0.91
KHDRBS3O75525 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KHDRBS3O75525 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KHDRBS3O75525 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KHDRBS3O75525 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.75■□□□□ 0.91
KHDRBS3O75525 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.75■□□□□ 0.91
KHDRBS3O75525 DUX4L9-201ENST00000449051 1259 ntBASIC20.75■□□□□ 0.91
KHDRBS3O75525 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.75■□□□□ 0.91
KHDRBS3O75525 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
KHDRBS3O75525 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KHDRBS3O75525 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
KHDRBS3O75525 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KHDRBS3O75525 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KHDRBS3O75525 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
KHDRBS3O75525 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
KHDRBS3O75525 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KHDRBS3O75525 AC087393.1-201ENST00000582896 145 ntBASIC20.74■□□□□ 0.91
KHDRBS3O75525 AC012676.1-201ENST00000574705 1949 ntBASIC20.74■□□□□ 0.91
KHDRBS3O75525 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KHDRBS3O75525 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KHDRBS3O75525 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
KHDRBS3O75525 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KHDRBS3O75525 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
KHDRBS3O75525 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KHDRBS3O75525 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.73■□□□□ 0.91
KHDRBS3O75525 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KHDRBS3O75525 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
KHDRBS3O75525 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KHDRBS3O75525 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
KHDRBS3O75525 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.72■□□□□ 0.91
KHDRBS3O75525 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KHDRBS3O75525 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
KHDRBS3O75525 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.72■□□□□ 0.91
KHDRBS3O75525 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KHDRBS3O75525 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
KHDRBS3O75525 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.72■□□□□ 0.91
KHDRBS3O75525 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KHDRBS3O75525 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KHDRBS3O75525 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
KHDRBS3O75525 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.71■□□□□ 0.91
KHDRBS3O75525 AC129492.7-201ENST00000622992 756 ntBASIC20.71■□□□□ 0.91
KHDRBS3O75525 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
KHDRBS3O75525 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KHDRBS3O75525 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
KHDRBS3O75525 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KHDRBS3O75525 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KHDRBS3O75525 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KHDRBS3O75525 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.71■□□□□ 0.91
KHDRBS3O75525 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
KHDRBS3O75525 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.71■□□□□ 0.91
KHDRBS3O75525 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.7■□□□□ 0.91
KHDRBS3O75525 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
KHDRBS3O75525 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KHDRBS3O75525 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KHDRBS3O75525 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KHDRBS3O75525 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KHDRBS3O75525 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KHDRBS3O75525 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KHDRBS3O75525 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
KHDRBS3O75525 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms