Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HCN1O60741 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HCN1O60741 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
HCN1O60741 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
HCN1O60741 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.56■■□□□ 1.04
HCN1O60741 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.56■■□□□ 1.04
HCN1O60741 AP003733.4-201ENST00000623785 1697 ntBASIC21.56■■□□□ 1.04
HCN1O60741 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
HCN1O60741 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
HCN1O60741 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
HCN1O60741 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HCN1O60741 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HCN1O60741 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HCN1O60741 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HCN1O60741 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
HCN1O60741 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.55■■□□□ 1.04
HCN1O60741 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HCN1O60741 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HCN1O60741 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.55■■□□□ 1.04
HCN1O60741 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
HCN1O60741 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
HCN1O60741 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
HCN1O60741 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HCN1O60741 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HCN1O60741 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HCN1O60741 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HCN1O60741 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HCN1O60741 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
HCN1O60741 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HCN1O60741 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.53■■□□□ 1.04
HCN1O60741 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.53■■□□□ 1.04
HCN1O60741 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HCN1O60741 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
HCN1O60741 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HCN1O60741 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HCN1O60741 SLC6A10P-202ENST00000431994 2058 ntBASIC21.52■■□□□ 1.04
HCN1O60741 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HCN1O60741 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HCN1O60741 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HCN1O60741 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HCN1O60741 KRT18P24-201ENST00000344739 1156 ntBASIC21.52■■□□□ 1.04
HCN1O60741 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.52■■□□□ 1.04
HCN1O60741 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.52■■□□□ 1.04
HCN1O60741 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
HCN1O60741 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HCN1O60741 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HCN1O60741 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
HCN1O60741 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
HCN1O60741 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
HCN1O60741 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
HCN1O60741 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
HCN1O60741 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
HCN1O60741 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
HCN1O60741 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HCN1O60741 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
HCN1O60741 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
HCN1O60741 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.51■■□□□ 1.03
HCN1O60741 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
HCN1O60741 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HCN1O60741 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.51■■□□□ 1.03
HCN1O60741 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.51■■□□□ 1.03
HCN1O60741 AC012676.1-201ENST00000574705 1949 ntBASIC21.51■■□□□ 1.03
HCN1O60741 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HCN1O60741 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HCN1O60741 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HCN1O60741 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
HCN1O60741 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
HCN1O60741 AL592295.1-201ENST00000400984 884 ntBASIC21.5■■□□□ 1.03
HCN1O60741 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.5■■□□□ 1.03
HCN1O60741 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.5■■□□□ 1.03
HCN1O60741 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.5■■□□□ 1.03
HCN1O60741 Z92544.1-202ENST00000571933 1220 ntBASIC21.5■■□□□ 1.03
HCN1O60741 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HCN1O60741 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HCN1O60741 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HCN1O60741 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.49■■□□□ 1.03
HCN1O60741 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
HCN1O60741 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
HCN1O60741 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
HCN1O60741 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.49■■□□□ 1.03
HCN1O60741 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
HCN1O60741 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HCN1O60741 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.48■■□□□ 1.03
HCN1O60741 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.48■■□□□ 1.03
HCN1O60741 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HCN1O60741 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.48■■□□□ 1.03
HCN1O60741 THA1P-201ENST00000590384 1145 ntBASIC21.48■■□□□ 1.03
HCN1O60741 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HCN1O60741 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.48■■□□□ 1.03
HCN1O60741 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HCN1O60741 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.47■■□□□ 1.03
HCN1O60741 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
HCN1O60741 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.47■■□□□ 1.03
HCN1O60741 GUSBP5-201ENST00000418136 578 ntBASIC21.47■■□□□ 1.03
HCN1O60741 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HCN1O60741 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.47■■□□□ 1.03
HCN1O60741 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HCN1O60741 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HCN1O60741 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
HCN1O60741 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms