Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TNFRSF11BO00300 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TNFRSF11BO00300 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
TNFRSF11BO00300 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.42■■□□□ 1.02
TNFRSF11BO00300 RP9P-202ENST00000450133 1212 ntBASIC21.42■■□□□ 1.02
TNFRSF11BO00300 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
TNFRSF11BO00300 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
TNFRSF11BO00300 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
TNFRSF11BO00300 AC092296.2-201ENST00000589470 999 ntBASIC21.42■■□□□ 1.02
TNFRSF11BO00300 C9orf163-202ENST00000624034 2573 ntBASIC21.42■■□□□ 1.02
TNFRSF11BO00300 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TNFRSF11BO00300 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TNFRSF11BO00300 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
TNFRSF11BO00300 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TNFRSF11BO00300 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TNFRSF11BO00300 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TNFRSF11BO00300 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TNFRSF11BO00300 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.41■■□□□ 1.02
TNFRSF11BO00300 FOXO3B-201ENST00000395675 1928 ntBASIC21.41■■□□□ 1.02
TNFRSF11BO00300 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TNFRSF11BO00300 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TNFRSF11BO00300 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TNFRSF11BO00300 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
TNFRSF11BO00300 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TNFRSF11BO00300 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TNFRSF11BO00300 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TNFRSF11BO00300 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TNFRSF11BO00300 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TNFRSF11BO00300 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TNFRSF11BO00300 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TNFRSF11BO00300 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TNFRSF11BO00300 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TNFRSF11BO00300 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TNFRSF11BO00300 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TNFRSF11BO00300 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TNFRSF11BO00300 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
TNFRSF11BO00300 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
TNFRSF11BO00300 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.39■■□□□ 1.02
TNFRSF11BO00300 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TNFRSF11BO00300 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.39■■□□□ 1.02
TNFRSF11BO00300 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.01
TNFRSF11BO00300 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.39■■□□□ 1.01
TNFRSF11BO00300 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TNFRSF11BO00300 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TNFRSF11BO00300 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TNFRSF11BO00300 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TNFRSF11BO00300 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TNFRSF11BO00300 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
TNFRSF11BO00300 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TNFRSF11BO00300 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TNFRSF11BO00300 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TNFRSF11BO00300 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TNFRSF11BO00300 ECEL1P2-201ENST00000461596 1295 ntBASIC21.38■■□□□ 1.01
TNFRSF11BO00300 AC093536.1-201ENST00000569153 554 ntBASIC21.38■■□□□ 1.01
TNFRSF11BO00300 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.38■■□□□ 1.01
TNFRSF11BO00300 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.38■■□□□ 1.01
TNFRSF11BO00300 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.38■■□□□ 1.01
TNFRSF11BO00300 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TNFRSF11BO00300 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TNFRSF11BO00300 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.37■■□□□ 1.01
TNFRSF11BO00300 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.37■■□□□ 1.01
TNFRSF11BO00300 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TNFRSF11BO00300 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.37■■□□□ 1.01
TNFRSF11BO00300 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.37■■□□□ 1.01
TNFRSF11BO00300 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.36■■□□□ 1.01
TNFRSF11BO00300 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TNFRSF11BO00300 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TNFRSF11BO00300 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
TNFRSF11BO00300 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TNFRSF11BO00300 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
TNFRSF11BO00300 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.36■■□□□ 1.01
TNFRSF11BO00300 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TNFRSF11BO00300 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TNFRSF11BO00300 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.35■■□□□ 1.01
TNFRSF11BO00300 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.35■■□□□ 1.01
TNFRSF11BO00300 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.35■■□□□ 1.01
TNFRSF11BO00300 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TNFRSF11BO00300 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
TNFRSF11BO00300 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TNFRSF11BO00300 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TNFRSF11BO00300 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
TNFRSF11BO00300 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
TNFRSF11BO00300 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.34■■□□□ 1.01
TNFRSF11BO00300 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TNFRSF11BO00300 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TNFRSF11BO00300 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TNFRSF11BO00300 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
TNFRSF11BO00300 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TNFRSF11BO00300 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TNFRSF11BO00300 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
TNFRSF11BO00300 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.33■■□□□ 1
TNFRSF11BO00300 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1
TNFRSF11BO00300 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TNFRSF11BO00300 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TNFRSF11BO00300 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.32■■□□□ 1
TNFRSF11BO00300 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.32■■□□□ 1
TNFRSF11BO00300 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.32■■□□□ 1
TNFRSF11BO00300 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TNFRSF11BO00300 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TNFRSF11BO00300 KRT18P10-201ENST00000388836 1287 ntBASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms