Protein–RNA interactions for Protein: B2RD01

CENPBD1, CENPB DNA-binding domain-containing protein 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPBD1B2RD01 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21■□□□□ 0.95
CENPBD1B2RD01 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21■□□□□ 0.95
CENPBD1B2RD01 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CENPBD1B2RD01 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21■□□□□ 0.95
CENPBD1B2RD01 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CENPBD1B2RD01 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CENPBD1B2RD01 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CENPBD1B2RD01 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CENPBD1B2RD01 RPS2P7-201ENST00000447334 885 ntBASIC20.99■□□□□ 0.95
CENPBD1B2RD01 MIR6765-201ENST00000614092 87 ntBASIC20.99■□□□□ 0.95
CENPBD1B2RD01 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CENPBD1B2RD01 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CENPBD1B2RD01 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CENPBD1B2RD01 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.98■□□□□ 0.95
CENPBD1B2RD01 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CENPBD1B2RD01 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CENPBD1B2RD01 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CENPBD1B2RD01 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CENPBD1B2RD01 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.97■□□□□ 0.95
CENPBD1B2RD01 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
CENPBD1B2RD01 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CENPBD1B2RD01 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CENPBD1B2RD01 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CENPBD1B2RD01 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CENPBD1B2RD01 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.97■□□□□ 0.95
CENPBD1B2RD01 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CENPBD1B2RD01 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CENPBD1B2RD01 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.97■□□□□ 0.95
CENPBD1B2RD01 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CENPBD1B2RD01 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CENPBD1B2RD01 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CENPBD1B2RD01 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CENPBD1B2RD01 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CENPBD1B2RD01 SPCS2P3-201ENST00000500401 656 ntBASIC20.96■□□□□ 0.95
CENPBD1B2RD01 AC087393.1-201ENST00000582896 145 ntBASIC20.96■□□□□ 0.95
CENPBD1B2RD01 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CENPBD1B2RD01 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.95■□□□□ 0.94
CENPBD1B2RD01 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CENPBD1B2RD01 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.95■□□□□ 0.94
CENPBD1B2RD01 DUX4L9-201ENST00000449051 1259 ntBASIC20.95■□□□□ 0.94
CENPBD1B2RD01 NTF6A-201ENST00000591175 560 ntBASIC20.95■□□□□ 0.94
CENPBD1B2RD01 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.95■□□□□ 0.94
CENPBD1B2RD01 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CENPBD1B2RD01 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CENPBD1B2RD01 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.95■□□□□ 0.94
CENPBD1B2RD01 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.95■□□□□ 0.94
CENPBD1B2RD01 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CENPBD1B2RD01 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CENPBD1B2RD01 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.94■□□□□ 0.94
CENPBD1B2RD01 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.94■□□□□ 0.94
CENPBD1B2RD01 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.94■□□□□ 0.94
CENPBD1B2RD01 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CENPBD1B2RD01 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CENPBD1B2RD01 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CENPBD1B2RD01 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CENPBD1B2RD01 MIR6089-201ENST00000616698 64 ntBASIC20.94■□□□□ 0.94
CENPBD1B2RD01 AC129492.7-201ENST00000622992 756 ntBASIC20.94■□□□□ 0.94
CENPBD1B2RD01 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CENPBD1B2RD01 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CENPBD1B2RD01 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CENPBD1B2RD01 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CENPBD1B2RD01 KRT18P60-201ENST00000312876 1297 ntBASIC20.93■□□□□ 0.94
CENPBD1B2RD01 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.93■□□□□ 0.94
CENPBD1B2RD01 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
CENPBD1B2RD01 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CENPBD1B2RD01 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.93■□□□□ 0.94
CENPBD1B2RD01 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CENPBD1B2RD01 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CENPBD1B2RD01 FOXO3B-201ENST00000395675 1928 ntBASIC20.92■□□□□ 0.94
CENPBD1B2RD01 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CENPBD1B2RD01 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CENPBD1B2RD01 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CENPBD1B2RD01 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CENPBD1B2RD01 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.92■□□□□ 0.94
CENPBD1B2RD01 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CENPBD1B2RD01 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.92■□□□□ 0.94
CENPBD1B2RD01 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.92■□□□□ 0.94
CENPBD1B2RD01 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CENPBD1B2RD01 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CENPBD1B2RD01 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CENPBD1B2RD01 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CENPBD1B2RD01 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CENPBD1B2RD01 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CENPBD1B2RD01 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CENPBD1B2RD01 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CENPBD1B2RD01 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CENPBD1B2RD01 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CENPBD1B2RD01 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CENPBD1B2RD01 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CENPBD1B2RD01 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CENPBD1B2RD01 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CENPBD1B2RD01 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CENPBD1B2RD01 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CENPBD1B2RD01 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CENPBD1B2RD01 AC141586.4-201ENST00000624558 1573 ntBASIC20.89■□□□□ 0.94
CENPBD1B2RD01 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
CENPBD1B2RD01 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.94
CENPBD1B2RD01 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.89■□□□□ 0.94
CENPBD1B2RD01 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CENPBD1B2RD01 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms