Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.65■□□□□ 0.9
TVP23AA6NH52 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.65■□□□□ 0.9
TVP23AA6NH52 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TVP23AA6NH52 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.65■□□□□ 0.9
TVP23AA6NH52 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.65■□□□□ 0.9
TVP23AA6NH52 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TVP23AA6NH52 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TVP23AA6NH52 AC018755.3-202ENST00000596210 929 ntBASIC20.65■□□□□ 0.9
TVP23AA6NH52 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TVP23AA6NH52 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TVP23AA6NH52 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TVP23AA6NH52 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TVP23AA6NH52 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TVP23AA6NH52 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TVP23AA6NH52 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TVP23AA6NH52 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TVP23AA6NH52 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
TVP23AA6NH52 RPS2P7-201ENST00000447334 885 ntBASIC20.64■□□□□ 0.89
TVP23AA6NH52 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TVP23AA6NH52 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TVP23AA6NH52 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TVP23AA6NH52 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
TVP23AA6NH52 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.63■□□□□ 0.89
TVP23AA6NH52 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TVP23AA6NH52 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TVP23AA6NH52 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TVP23AA6NH52 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TVP23AA6NH52 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TVP23AA6NH52 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TVP23AA6NH52 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TVP23AA6NH52 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
TVP23AA6NH52 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TVP23AA6NH52 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TVP23AA6NH52 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TVP23AA6NH52 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TVP23AA6NH52 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TVP23AA6NH52 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TVP23AA6NH52 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.62■□□□□ 0.89
TVP23AA6NH52 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.62■□□□□ 0.89
TVP23AA6NH52 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TVP23AA6NH52 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TVP23AA6NH52 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TVP23AA6NH52 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.61■□□□□ 0.89
TVP23AA6NH52 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
TVP23AA6NH52 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
TVP23AA6NH52 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
TVP23AA6NH52 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TVP23AA6NH52 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TVP23AA6NH52 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
TVP23AA6NH52 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TVP23AA6NH52 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TVP23AA6NH52 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.6■□□□□ 0.89
TVP23AA6NH52 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.6■□□□□ 0.89
TVP23AA6NH52 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TVP23AA6NH52 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TVP23AA6NH52 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.6■□□□□ 0.89
TVP23AA6NH52 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TVP23AA6NH52 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TVP23AA6NH52 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TVP23AA6NH52 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.59■□□□□ 0.89
TVP23AA6NH52 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TVP23AA6NH52 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TVP23AA6NH52 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.59■□□□□ 0.89
TVP23AA6NH52 RARRES2P2-201ENST00000394842 485 ntBASIC20.59■□□□□ 0.89
TVP23AA6NH52 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
TVP23AA6NH52 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.59■□□□□ 0.89
TVP23AA6NH52 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.59■□□□□ 0.89
TVP23AA6NH52 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
TVP23AA6NH52 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
TVP23AA6NH52 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.59■□□□□ 0.89
TVP23AA6NH52 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TVP23AA6NH52 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
TVP23AA6NH52 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TVP23AA6NH52 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TVP23AA6NH52 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
TVP23AA6NH52 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TVP23AA6NH52 DUX4L9-201ENST00000449051 1259 ntBASIC20.58■□□□□ 0.89
TVP23AA6NH52 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
TVP23AA6NH52 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.58■□□□□ 0.89
TVP23AA6NH52 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TVP23AA6NH52 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TVP23AA6NH52 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.57■□□□□ 0.88
TVP23AA6NH52 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TVP23AA6NH52 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.57■□□□□ 0.88
TVP23AA6NH52 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.57■□□□□ 0.88
TVP23AA6NH52 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TVP23AA6NH52 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TVP23AA6NH52 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.57■□□□□ 0.88
TVP23AA6NH52 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TVP23AA6NH52 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
TVP23AA6NH52 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TVP23AA6NH52 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TVP23AA6NH52 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.56■□□□□ 0.88
TVP23AA6NH52 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.56■□□□□ 0.88
TVP23AA6NH52 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.56■□□□□ 0.88
TVP23AA6NH52 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TVP23AA6NH52 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TVP23AA6NH52 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TVP23AA6NH52 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.56■□□□□ 0.88
TVP23AA6NH52 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms