Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.45■■□□□ 1.02
SH3D21A4FU49 AC010980.1-201ENST00000587192 1142 ntBASIC21.45■■□□□ 1.02
SH3D21A4FU49 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.45■■□□□ 1.02
SH3D21A4FU49 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SH3D21A4FU49 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
SH3D21A4FU49 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
SH3D21A4FU49 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.44■■□□□ 1.02
SH3D21A4FU49 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH3D21A4FU49 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.44■■□□□ 1.02
SH3D21A4FU49 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.44■■□□□ 1.02
SH3D21A4FU49 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.44■■□□□ 1.02
SH3D21A4FU49 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH3D21A4FU49 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH3D21A4FU49 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.44■■□□□ 1.02
SH3D21A4FU49 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.43■■□□□ 1.02
SH3D21A4FU49 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.43■■□□□ 1.02
SH3D21A4FU49 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
SH3D21A4FU49 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.43■■□□□ 1.02
SH3D21A4FU49 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH3D21A4FU49 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.43■■□□□ 1.02
SH3D21A4FU49 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SH3D21A4FU49 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SH3D21A4FU49 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SH3D21A4FU49 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH3D21A4FU49 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.43■■□□□ 1.02
SH3D21A4FU49 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.42■■□□□ 1.02
SH3D21A4FU49 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.42■■□□□ 1.02
SH3D21A4FU49 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SH3D21A4FU49 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SH3D21A4FU49 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SH3D21A4FU49 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.42■■□□□ 1.02
SH3D21A4FU49 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SH3D21A4FU49 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.42■■□□□ 1.02
SH3D21A4FU49 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.42■■□□□ 1.02
SH3D21A4FU49 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.42■■□□□ 1.02
SH3D21A4FU49 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SH3D21A4FU49 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SH3D21A4FU49 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SH3D21A4FU49 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SH3D21A4FU49 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SH3D21A4FU49 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.41■■□□□ 1.02
SH3D21A4FU49 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SH3D21A4FU49 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SH3D21A4FU49 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.41■■□□□ 1.02
SH3D21A4FU49 AL451085.2-201ENST00000605085 799 ntBASIC21.41■■□□□ 1.02
SH3D21A4FU49 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.41■■□□□ 1.02
SH3D21A4FU49 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.41■■□□□ 1.02
SH3D21A4FU49 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SH3D21A4FU49 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
SH3D21A4FU49 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SH3D21A4FU49 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SH3D21A4FU49 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SH3D21A4FU49 KRT8P33-201ENST00000508125 1423 ntBASIC21.4■■□□□ 1.02
SH3D21A4FU49 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.4■■□□□ 1.02
SH3D21A4FU49 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SH3D21A4FU49 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SH3D21A4FU49 AL035685.1-201ENST00000636663 812 ntBASIC21.4■■□□□ 1.02
SH3D21A4FU49 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SH3D21A4FU49 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.4■■□□□ 1.02
SH3D21A4FU49 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SH3D21A4FU49 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SH3D21A4FU49 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SH3D21A4FU49 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SH3D21A4FU49 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.4■■□□□ 1.02
SH3D21A4FU49 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SH3D21A4FU49 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
SH3D21A4FU49 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.02
SH3D21A4FU49 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SH3D21A4FU49 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.39■■□□□ 1.01
SH3D21A4FU49 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
SH3D21A4FU49 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.01
SH3D21A4FU49 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SH3D21A4FU49 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SH3D21A4FU49 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.39■■□□□ 1.01
SH3D21A4FU49 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SH3D21A4FU49 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SH3D21A4FU49 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SH3D21A4FU49 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
SH3D21A4FU49 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
SH3D21A4FU49 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SH3D21A4FU49 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SH3D21A4FU49 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SH3D21A4FU49 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.38■■□□□ 1.01
SH3D21A4FU49 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SH3D21A4FU49 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.37■■□□□ 1.01
SH3D21A4FU49 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SH3D21A4FU49 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SH3D21A4FU49 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.37■■□□□ 1.01
SH3D21A4FU49 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SH3D21A4FU49 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SH3D21A4FU49 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.37■■□□□ 1.01
SH3D21A4FU49 YBX1P4-201ENST00000392794 808 ntBASIC21.37■■□□□ 1.01
SH3D21A4FU49 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SH3D21A4FU49 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SH3D21A4FU49 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SH3D21A4FU49 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SH3D21A4FU49 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.36■■□□□ 1.01
SH3D21A4FU49 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SH3D21A4FU49 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SH3D21A4FU49 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms