Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.14■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.13■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.13■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.13■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.13■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 THA1P-201ENST00000590384 1145 ntBASIC21.13■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.13■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.13■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 AL139125.2-201ENST00000623134 1869 ntBASIC21.12■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.12■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.12■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.11■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.11■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 HLA-L-211ENST00000482052 1765 ntBASIC21.1■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.1■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.1■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.1■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.1■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 GUSBP5-201ENST00000418136 578 ntBASIC21.09■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.09■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.09■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TNFSF12-TNFSF13A0A0A6YY99 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TNFSF12-TNFSF13A0A0A6YY99 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TNFSF12-TNFSF13A0A0A6YY99 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TNFSF12-TNFSF13A0A0A6YY99 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
TNFSF12-TNFSF13A0A0A6YY99 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TNFSF12-TNFSF13A0A0A6YY99 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TNFSF12-TNFSF13A0A0A6YY99 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TNFSF12-TNFSF13A0A0A6YY99 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.07■□□□□ 0.96
TNFSF12-TNFSF13A0A0A6YY99 MIR4281-201ENST00000580852 62 ntBASIC21.07■□□□□ 0.96
TNFSF12-TNFSF13A0A0A6YY99 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.07■□□□□ 0.96
TNFSF12-TNFSF13A0A0A6YY99 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.07■□□□□ 0.96
TNFSF12-TNFSF13A0A0A6YY99 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TNFSF12-TNFSF13A0A0A6YY99 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNFSF12-TNFSF13A0A0A6YY99 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNFSF12-TNFSF13A0A0A6YY99 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNFSF12-TNFSF13A0A0A6YY99 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNFSF12-TNFSF13A0A0A6YY99 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.06■□□□□ 0.96
TNFSF12-TNFSF13A0A0A6YY99 Z92544.1-202ENST00000571933 1220 ntBASIC21.05■□□□□ 0.96
TNFSF12-TNFSF13A0A0A6YY99 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.05■□□□□ 0.96
TNFSF12-TNFSF13A0A0A6YY99 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TNFSF12-TNFSF13A0A0A6YY99 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TNFSF12-TNFSF13A0A0A6YY99 AC239859.2-201ENST00000444165 318 ntBASIC21.04■□□□□ 0.96
TNFSF12-TNFSF13A0A0A6YY99 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.04■□□□□ 0.96
TNFSF12-TNFSF13A0A0A6YY99 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNFSF12-TNFSF13A0A0A6YY99 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.04■□□□□ 0.96
TNFSF12-TNFSF13A0A0A6YY99 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNFSF12-TNFSF13A0A0A6YY99 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.04■□□□□ 0.96
TNFSF12-TNFSF13A0A0A6YY99 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
TNFSF12-TNFSF13A0A0A6YY99 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNFSF12-TNFSF13A0A0A6YY99 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.03■□□□□ 0.96
TNFSF12-TNFSF13A0A0A6YY99 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNFSF12-TNFSF13A0A0A6YY99 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.03■□□□□ 0.96
TNFSF12-TNFSF13A0A0A6YY99 LINC01124-201ENST00000409786 2117 ntBASIC21.02■□□□□ 0.96
TNFSF12-TNFSF13A0A0A6YY99 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
TNFSF12-TNFSF13A0A0A6YY99 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TNFSF12-TNFSF13A0A0A6YY99 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
TNFSF12-TNFSF13A0A0A6YY99 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
TNFSF12-TNFSF13A0A0A6YY99 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.02■□□□□ 0.96
TNFSF12-TNFSF13A0A0A6YY99 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TNFSF12-TNFSF13A0A0A6YY99 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.02■□□□□ 0.96
TNFSF12-TNFSF13A0A0A6YY99 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
TNFSF12-TNFSF13A0A0A6YY99 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.02■□□□□ 0.96
TNFSF12-TNFSF13A0A0A6YY99 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
TNFSF12-TNFSF13A0A0A6YY99 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms