Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV30A0A087WSZ9 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV30A0A087WSZ9 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.15■□□□□ 0.5
TRAV30A0A087WSZ9 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAV30A0A087WSZ9 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAV30A0A087WSZ9 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV30A0A087WSZ9 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV30A0A087WSZ9 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRAV30A0A087WSZ9 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRAV30A0A087WSZ9 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV30A0A087WSZ9 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV30A0A087WSZ9 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV30A0A087WSZ9 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV30A0A087WSZ9 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
TRAV30A0A087WSZ9 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV30A0A087WSZ9 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.14■□□□□ 0.49
TRAV30A0A087WSZ9 RPS2P7-201ENST00000447334 885 ntBASIC18.14■□□□□ 0.49
TRAV30A0A087WSZ9 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TRAV30A0A087WSZ9 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV30A0A087WSZ9 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV30A0A087WSZ9 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV30A0A087WSZ9 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV30A0A087WSZ9 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TRAV30A0A087WSZ9 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.13■□□□□ 0.49
TRAV30A0A087WSZ9 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV30A0A087WSZ9 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV30A0A087WSZ9 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TRAV30A0A087WSZ9 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAV30A0A087WSZ9 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV30A0A087WSZ9 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAV30A0A087WSZ9 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.13■□□□□ 0.49
TRAV30A0A087WSZ9 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV30A0A087WSZ9 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV30A0A087WSZ9 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV30A0A087WSZ9 HLA-L-211ENST00000482052 1765 ntBASIC18.12■□□□□ 0.49
TRAV30A0A087WSZ9 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TRAV30A0A087WSZ9 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV30A0A087WSZ9 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV30A0A087WSZ9 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV30A0A087WSZ9 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV30A0A087WSZ9 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV30A0A087WSZ9 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.12■□□□□ 0.49
TRAV30A0A087WSZ9 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TRAV30A0A087WSZ9 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TRAV30A0A087WSZ9 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV30A0A087WSZ9 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV30A0A087WSZ9 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TRAV30A0A087WSZ9 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV30A0A087WSZ9 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV30A0A087WSZ9 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV30A0A087WSZ9 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV30A0A087WSZ9 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TRAV30A0A087WSZ9 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC18.1■□□□□ 0.49
TRAV30A0A087WSZ9 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.1■□□□□ 0.49
TRAV30A0A087WSZ9 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.1■□□□□ 0.49
TRAV30A0A087WSZ9 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV30A0A087WSZ9 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.1■□□□□ 0.49
TRAV30A0A087WSZ9 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV30A0A087WSZ9 AL592293.1-201ENST00000502889 1188 ntBASIC18.1■□□□□ 0.49
TRAV30A0A087WSZ9 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
TRAV30A0A087WSZ9 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.1■□□□□ 0.49
TRAV30A0A087WSZ9 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV30A0A087WSZ9 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV30A0A087WSZ9 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV30A0A087WSZ9 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV30A0A087WSZ9 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV30A0A087WSZ9 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.09■□□□□ 0.49
TRAV30A0A087WSZ9 AL592295.1-201ENST00000400984 884 ntBASIC18.09■□□□□ 0.49
TRAV30A0A087WSZ9 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.09■□□□□ 0.49
TRAV30A0A087WSZ9 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV30A0A087WSZ9 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.09■□□□□ 0.49
TRAV30A0A087WSZ9 MIR6765-201ENST00000614092 87 ntBASIC18.09■□□□□ 0.49
TRAV30A0A087WSZ9 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV30A0A087WSZ9 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV30A0A087WSZ9 AC079834.2-201ENST00000609776 1949 ntBASIC18.09■□□□□ 0.49
TRAV30A0A087WSZ9 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV30A0A087WSZ9 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV30A0A087WSZ9 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV30A0A087WSZ9 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV30A0A087WSZ9 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.08■□□□□ 0.49
TRAV30A0A087WSZ9 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
TRAV30A0A087WSZ9 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV30A0A087WSZ9 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV30A0A087WSZ9 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV30A0A087WSZ9 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV30A0A087WSZ9 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
TRAV30A0A087WSZ9 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
TRAV30A0A087WSZ9 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV30A0A087WSZ9 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
TRAV30A0A087WSZ9 AC087393.1-201ENST00000582896 145 ntBASIC18.07■□□□□ 0.48
TRAV30A0A087WSZ9 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.07■□□□□ 0.48
TRAV30A0A087WSZ9 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV30A0A087WSZ9 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
TRAV30A0A087WSZ9 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV30A0A087WSZ9 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.06■□□□□ 0.48
TRAV30A0A087WSZ9 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAV30A0A087WSZ9 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV30A0A087WSZ9 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAV30A0A087WSZ9 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV30A0A087WSZ9 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms