Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBQLN4Q9NRR5 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBQLN4Q9NRR5 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBQLN4Q9NRR5 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBQLN4Q9NRR5 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
UBQLN4Q9NRR5 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
UBQLN4Q9NRR5 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
UBQLN4Q9NRR5 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.31□□□□□ -0.12
UBQLN4Q9NRR5 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.31□□□□□ -0.12
UBQLN4Q9NRR5 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.31□□□□□ -0.12
UBQLN4Q9NRR5 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.31□□□□□ -0.12
UBQLN4Q9NRR5 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBQLN4Q9NRR5 RARRES2P5-201ENST00000564013 466 ntBASIC14.31□□□□□ -0.12
UBQLN4Q9NRR5 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.31□□□□□ -0.12
UBQLN4Q9NRR5 AL158212.4-201ENST00000624062 1286 ntBASIC14.31□□□□□ -0.12
UBQLN4Q9NRR5 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.31□□□□□ -0.12
UBQLN4Q9NRR5 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.31□□□□□ -0.12
UBQLN4Q9NRR5 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBQLN4Q9NRR5 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
UBQLN4Q9NRR5 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.31□□□□□ -0.12
UBQLN4Q9NRR5 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBQLN4Q9NRR5 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBQLN4Q9NRR5 AC148477.4-201ENST00000613430 1793 ntBASIC14.31□□□□□ -0.12
UBQLN4Q9NRR5 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBQLN4Q9NRR5 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBQLN4Q9NRR5 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBQLN4Q9NRR5 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
UBQLN4Q9NRR5 PCDHA3-202ENST00000532566 4594 ntBASIC14.31□□□□□ -0.12
UBQLN4Q9NRR5 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBQLN4Q9NRR5 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.31□□□□□ -0.12
UBQLN4Q9NRR5 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
UBQLN4Q9NRR5 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
UBQLN4Q9NRR5 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBQLN4Q9NRR5 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
UBQLN4Q9NRR5 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 AL589987.1-201ENST00000453380 819 ntBASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 TPRX2P-201ENST00000535362 881 ntBASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 AC011467.4-201ENST00000594891 528 ntBASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 AC025181.2-201ENST00000606994 802 ntBASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 AL645728.2-202ENST00000641679 227 ntBASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 AL136379.1-201ENST00000623471 2642 ntBASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
UBQLN4Q9NRR5 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms