Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 AC105917.1-201ENST00000506637 2539 ntBASIC16.1■□□□□ 0.17
HPS4Q9NQG7 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 AL355994.2-201ENST00000447882 704 ntBASIC16.1■□□□□ 0.17
HPS4Q9NQG7 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 RN7SL219P-201ENST00000582872 296 ntBASIC16.1■□□□□ 0.17
HPS4Q9NQG7 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 MIR6869-201ENST00000619434 62 ntBASIC16.1■□□□□ 0.17
HPS4Q9NQG7 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 AC132872.4-202ENST00000622924 2756 ntBASIC16.1■□□□□ 0.17
HPS4Q9NQG7 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HPS4Q9NQG7 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 MIR648-201ENST00000385046 94 ntBASIC16.09■□□□□ 0.17
HPS4Q9NQG7 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 AC016694.1-201ENST00000434179 700 ntBASIC16.09■□□□□ 0.17
HPS4Q9NQG7 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 FAM8A2P-201ENST00000528813 1142 ntBASIC16.09■□□□□ 0.17
HPS4Q9NQG7 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms