Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EFCC1Q9HA90 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EFCC1Q9HA90 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
EFCC1Q9HA90 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EFCC1Q9HA90 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EFCC1Q9HA90 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EFCC1Q9HA90 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
EFCC1Q9HA90 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.11■□□□□ 0.49
EFCC1Q9HA90 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.11■□□□□ 0.49
EFCC1Q9HA90 AC104640.1-201ENST00000562617 2109 ntBASIC18.11■□□□□ 0.49
EFCC1Q9HA90 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EFCC1Q9HA90 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
EFCC1Q9HA90 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
EFCC1Q9HA90 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EFCC1Q9HA90 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
EFCC1Q9HA90 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 CSH2-202ENST00000345366 598 ntTSL 5 BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 ACKR1-201ENST00000368121 1240 ntBASIC18.1■□□□□ 0.49
EFCC1Q9HA90 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 MTX1P1-201ENST00000440904 838 ntBASIC18.1■□□□□ 0.49
EFCC1Q9HA90 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 HNRNPA1P48-202ENST00000565308 961 ntBASIC18.1■□□□□ 0.49
EFCC1Q9HA90 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
EFCC1Q9HA90 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.09■□□□□ 0.49
EFCC1Q9HA90 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
EFCC1Q9HA90 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EFCC1Q9HA90 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
EFCC1Q9HA90 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.09■□□□□ 0.49
EFCC1Q9HA90 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
EFCC1Q9HA90 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EFCC1Q9HA90 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
EFCC1Q9HA90 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
EFCC1Q9HA90 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.09■□□□□ 0.49
EFCC1Q9HA90 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EFCC1Q9HA90 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
EFCC1Q9HA90 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EFCC1Q9HA90 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
EFCC1Q9HA90 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EFCC1Q9HA90 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
EFCC1Q9HA90 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
EFCC1Q9HA90 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
EFCC1Q9HA90 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
EFCC1Q9HA90 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
EFCC1Q9HA90 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
EFCC1Q9HA90 KRTAP10-13P-201ENST00000412914 571 ntBASIC18.09■□□□□ 0.49
EFCC1Q9HA90 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EFCC1Q9HA90 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC18.09■□□□□ 0.49
EFCC1Q9HA90 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC18.09■□□□□ 0.49
EFCC1Q9HA90 HNRNPUP1-201ENST00000554987 333 ntBASIC18.09■□□□□ 0.49
EFCC1Q9HA90 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
EFCC1Q9HA90 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC18.09■□□□□ 0.49
EFCC1Q9HA90 MIR3619-201ENST00000579667 83 ntBASIC18.09■□□□□ 0.49
EFCC1Q9HA90 MIR5572-201ENST00000583188 137 ntBASIC18.09■□□□□ 0.49
EFCC1Q9HA90 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC18.09■□□□□ 0.49
EFCC1Q9HA90 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC18.09■□□□□ 0.49
EFCC1Q9HA90 AC138627.1-207ENST00000641560 1006 ntBASIC18.09■□□□□ 0.49
EFCC1Q9HA90 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
EFCC1Q9HA90 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms