Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 CFL1-214ENST00000534769 758 ntTSL 2 BASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 AC243562.2-201ENST00000561247 970 ntBASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 AP005019.2-201ENST00000615104 511 ntBASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
UBE2OQ9C0C9 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 AC005052.1-201ENST00000625181 2492 ntBASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 CD8B2-202ENST00000417670 633 ntBASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 MSRA-203ENST00000441698 788 ntTSL 2 BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 SERPINA13P-202ENST00000478994 924 ntBASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 AL354989.2-201ENST00000435838 1540 ntBASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
UBE2OQ9C0C9 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBE2OQ9C0C9 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBE2OQ9C0C9 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBE2OQ9C0C9 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.09■□□□□ 0.33
UBE2OQ9C0C9 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBE2OQ9C0C9 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.09■□□□□ 0.33
UBE2OQ9C0C9 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBE2OQ9C0C9 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
UBE2OQ9C0C9 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UBE2OQ9C0C9 UFM1-202ENST00000379649 846 ntTSL 4 BASIC17.09■□□□□ 0.33
UBE2OQ9C0C9 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBE2OQ9C0C9 AC234644.1-201ENST00000406065 370 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms