Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB40CQ96S21 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB40CQ96S21 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
RAB40CQ96S21 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.67□□□□□ -0.38
RAB40CQ96S21 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB40CQ96S21 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB40CQ96S21 BEND3P1-201ENST00000421591 1944 ntBASIC12.67□□□□□ -0.38
RAB40CQ96S21 BX640514.1-201ENST00000583223 1918 ntBASIC12.67□□□□□ -0.38
RAB40CQ96S21 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB40CQ96S21 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB40CQ96S21 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB40CQ96S21 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC12.67□□□□□ -0.38
RAB40CQ96S21 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB40CQ96S21 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RAB40CQ96S21 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC12.67□□□□□ -0.38
RAB40CQ96S21 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC12.67□□□□□ -0.38
RAB40CQ96S21 POLD4-207ENST00000531239 584 ntTSL 2 BASIC12.67□□□□□ -0.38
RAB40CQ96S21 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC12.67□□□□□ -0.38
RAB40CQ96S21 CD63-210ENST00000550776 870 ntTSL 5 BASIC12.67□□□□□ -0.38
RAB40CQ96S21 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC12.67□□□□□ -0.38
RAB40CQ96S21 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC12.67□□□□□ -0.38
RAB40CQ96S21 AC061975.2-201ENST00000581722 295 ntBASIC12.67□□□□□ -0.38
RAB40CQ96S21 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
RAB40CQ96S21 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC12.67□□□□□ -0.38
RAB40CQ96S21 FAM215A-202ENST00000632077 792 ntBASIC12.67□□□□□ -0.38
RAB40CQ96S21 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB40CQ96S21 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB40CQ96S21 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB40CQ96S21 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.67□□□□□ -0.38
RAB40CQ96S21 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.67□□□□□ -0.38
RAB40CQ96S21 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.67□□□□□ -0.38
RAB40CQ96S21 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB40CQ96S21 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB40CQ96S21 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB40CQ96S21 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
RAB40CQ96S21 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB40CQ96S21 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RAB40CQ96S21 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB40CQ96S21 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
RAB40CQ96S21 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
RAB40CQ96S21 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
RAB40CQ96S21 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB40CQ96S21 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RAB40CQ96S21 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC12.67□□□□□ -0.38
RAB40CQ96S21 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
RAB40CQ96S21 ACE3P-201ENST00000423435 1973 ntBASIC12.67□□□□□ -0.38
RAB40CQ96S21 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.67□□□□□ -0.38
RAB40CQ96S21 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB40CQ96S21 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB40CQ96S21 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.67□□□□□ -0.38
RAB40CQ96S21 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB40CQ96S21 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB40CQ96S21 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
RAB40CQ96S21 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.66□□□□□ -0.38
RAB40CQ96S21 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC12.66□□□□□ -0.38
RAB40CQ96S21 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
RAB40CQ96S21 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB40CQ96S21 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
RAB40CQ96S21 AP002414.3-201ENST00000589352 1468 ntBASIC12.66□□□□□ -0.38
RAB40CQ96S21 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
RAB40CQ96S21 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.66□□□□□ -0.38
RAB40CQ96S21 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB40CQ96S21 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB40CQ96S21 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB40CQ96S21 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB40CQ96S21 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB40CQ96S21 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB40CQ96S21 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB40CQ96S21 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
RAB40CQ96S21 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
RAB40CQ96S21 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB40CQ96S21 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB40CQ96S21 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
RAB40CQ96S21 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC12.66□□□□□ -0.38
RAB40CQ96S21 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB40CQ96S21 FALEC-201ENST00000416894 566 ntTSL 3 BASIC12.66□□□□□ -0.38
RAB40CQ96S21 AL031284.1-201ENST00000419297 478 ntBASIC12.66□□□□□ -0.38
RAB40CQ96S21 RPS8P6-201ENST00000426177 609 ntBASIC12.66□□□□□ -0.38
RAB40CQ96S21 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC12.66□□□□□ -0.38
RAB40CQ96S21 AC140658.5-201ENST00000438532 169 ntBASIC12.66□□□□□ -0.38
RAB40CQ96S21 PPIE-208ENST00000470213 927 ntTSL 3 BASIC12.66□□□□□ -0.38
RAB40CQ96S21 AC093909.1-201ENST00000504731 1122 ntBASIC12.66□□□□□ -0.38
RAB40CQ96S21 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC12.66□□□□□ -0.38
RAB40CQ96S21 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC12.66□□□□□ -0.38
RAB40CQ96S21 AL662844.1-201ENST00000546340 181 ntBASIC12.66□□□□□ -0.38
RAB40CQ96S21 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC12.66□□□□□ -0.38
RAB40CQ96S21 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC12.66□□□□□ -0.38
RAB40CQ96S21 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC12.66□□□□□ -0.38
RAB40CQ96S21 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB40CQ96S21 AC011467.4-201ENST00000594891 528 ntBASIC12.66□□□□□ -0.38
RAB40CQ96S21 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB40CQ96S21 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.66□□□□□ -0.38
RAB40CQ96S21 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB40CQ96S21 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.66□□□□□ -0.38
RAB40CQ96S21 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12.66□□□□□ -0.38
RAB40CQ96S21 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB40CQ96S21 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.66□□□□□ -0.38
RAB40CQ96S21 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB40CQ96S21 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB40CQ96S21 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms