Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NR1H4Q96RI1 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NR1H4Q96RI1 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
NR1H4Q96RI1 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.7□□□□□ -0.06
NR1H4Q96RI1 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NR1H4Q96RI1 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.7□□□□□ -0.06
NR1H4Q96RI1 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
NR1H4Q96RI1 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NR1H4Q96RI1 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NR1H4Q96RI1 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.7□□□□□ -0.06
NR1H4Q96RI1 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
NR1H4Q96RI1 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
NR1H4Q96RI1 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
NR1H4Q96RI1 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 AC083964.2-201ENST00000623988 2396 ntBASIC14.69□□□□□ -0.06
NR1H4Q96RI1 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 AC087641.1-201ENST00000557561 1021 ntBASIC14.69□□□□□ -0.06
NR1H4Q96RI1 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 NTF6B-201ENST00000591913 560 ntBASIC14.69□□□□□ -0.06
NR1H4Q96RI1 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 AC023090.2-201ENST00000625182 2110 ntBASIC14.69□□□□□ -0.06
NR1H4Q96RI1 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.69□□□□□ -0.06
NR1H4Q96RI1 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 KRT18P1-202ENST00000452408 1331 ntBASIC14.68□□□□□ -0.06
NR1H4Q96RI1 AC005332.1-201ENST00000577698 1310 ntBASIC14.68□□□□□ -0.06
NR1H4Q96RI1 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms