Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SIX5Q8N196 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SIX5Q8N196 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SIX5Q8N196 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SIX5Q8N196 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SIX5Q8N196 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SIX5Q8N196 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SIX5Q8N196 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.94■□□□□ 0.14
SIX5Q8N196 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.94■□□□□ 0.14
SIX5Q8N196 UBALD1-205ENST00000590891 2641 ntBASIC15.94■□□□□ 0.14
SIX5Q8N196 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SIX5Q8N196 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
SIX5Q8N196 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SIX5Q8N196 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SIX5Q8N196 HNRNPUP1-201ENST00000554987 333 ntBASIC15.94■□□□□ 0.14
SIX5Q8N196 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.94■□□□□ 0.14
SIX5Q8N196 MIR5572-201ENST00000583188 137 ntBASIC15.94■□□□□ 0.14
SIX5Q8N196 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC15.94■□□□□ 0.14
SIX5Q8N196 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.94■□□□□ 0.14
SIX5Q8N196 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SIX5Q8N196 SPCS2P2-201ENST00000603270 608 ntBASIC15.94■□□□□ 0.14
SIX5Q8N196 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SIX5Q8N196 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC15.94■□□□□ 0.14
SIX5Q8N196 RN7SL832P-201ENST00000607781 1756 ntBASIC15.94■□□□□ 0.14
SIX5Q8N196 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.94■□□□□ 0.14
SIX5Q8N196 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.94■□□□□ 0.14
SIX5Q8N196 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SIX5Q8N196 REXO1L1P-202ENST00000608646 1974 ntBASIC15.94■□□□□ 0.14
SIX5Q8N196 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SIX5Q8N196 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SIX5Q8N196 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SIX5Q8N196 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SIX5Q8N196 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SIX5Q8N196 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SIX5Q8N196 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SIX5Q8N196 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SIX5Q8N196 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SIX5Q8N196 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SIX5Q8N196 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.94■□□□□ 0.14
SIX5Q8N196 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SIX5Q8N196 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SIX5Q8N196 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SIX5Q8N196 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SIX5Q8N196 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.94■□□□□ 0.14
SIX5Q8N196 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.94■□□□□ 0.14
SIX5Q8N196 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.94■□□□□ 0.14
SIX5Q8N196 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SIX5Q8N196 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SIX5Q8N196 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SIX5Q8N196 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.93■□□□□ 0.14
SIX5Q8N196 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SIX5Q8N196 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.93■□□□□ 0.14
SIX5Q8N196 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SIX5Q8N196 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.93■□□□□ 0.14
SIX5Q8N196 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
SIX5Q8N196 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SIX5Q8N196 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SIX5Q8N196 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SIX5Q8N196 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.93■□□□□ 0.14
SIX5Q8N196 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
SIX5Q8N196 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.93■□□□□ 0.14
SIX5Q8N196 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SIX5Q8N196 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.93■□□□□ 0.14
SIX5Q8N196 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
SIX5Q8N196 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SIX5Q8N196 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SIX5Q8N196 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SIX5Q8N196 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SIX5Q8N196 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SIX5Q8N196 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SIX5Q8N196 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SIX5Q8N196 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC15.93■□□□□ 0.14
SIX5Q8N196 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.93■□□□□ 0.14
SIX5Q8N196 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.93■□□□□ 0.14
SIX5Q8N196 DEF8-202ENST00000418391 852 ntTSL 2 BASIC15.93■□□□□ 0.14
SIX5Q8N196 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.93■□□□□ 0.14
SIX5Q8N196 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SIX5Q8N196 AC245884.6-201ENST00000515672 1067 ntBASIC15.93■□□□□ 0.14
SIX5Q8N196 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.93■□□□□ 0.14
SIX5Q8N196 AC126915.1-201ENST00000522847 1038 ntBASIC15.93■□□□□ 0.14
SIX5Q8N196 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.93■□□□□ 0.14
SIX5Q8N196 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.93■□□□□ 0.14
SIX5Q8N196 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.93■□□□□ 0.14
SIX5Q8N196 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC15.93■□□□□ 0.14
SIX5Q8N196 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SIX5Q8N196 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC15.93■□□□□ 0.14
SIX5Q8N196 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC15.93■□□□□ 0.14
SIX5Q8N196 CU633904.3-201ENST00000624042 1029 ntBASIC15.93■□□□□ 0.14
SIX5Q8N196 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.93■□□□□ 0.14
SIX5Q8N196 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.93■□□□□ 0.14
SIX5Q8N196 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.93■□□□□ 0.14
SIX5Q8N196 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SIX5Q8N196 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.93■□□□□ 0.14
SIX5Q8N196 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.93■□□□□ 0.14
SIX5Q8N196 AL354989.2-201ENST00000435838 1540 ntBASIC15.93■□□□□ 0.14
SIX5Q8N196 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SIX5Q8N196 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SIX5Q8N196 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SIX5Q8N196 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SIX5Q8N196 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms