Protein–RNA interactions for Protein: P84550

SKOR1, SKI family transcriptional corepressor 1, humanhuman

Predictions only

Length 965 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKOR1P84550 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SKOR1P84550 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SKOR1P84550 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SKOR1P84550 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SKOR1P84550 AC007686.3-201ENST00000619017 3487 ntBASIC16.4■□□□□ 0.22
SKOR1P84550 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SKOR1P84550 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SKOR1P84550 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SKOR1P84550 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.4■□□□□ 0.22
SKOR1P84550 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SKOR1P84550 HAUS4P1-201ENST00000406739 1145 ntBASIC16.4■□□□□ 0.22
SKOR1P84550 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.4■□□□□ 0.22
SKOR1P84550 RBPMS2P1-201ENST00000437762 623 ntBASIC16.4■□□□□ 0.22
SKOR1P84550 AC244107.1-201ENST00000442033 332 ntBASIC16.4■□□□□ 0.22
SKOR1P84550 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.4■□□□□ 0.22
SKOR1P84550 AC109322.1-201ENST00000524499 1264 ntBASIC16.4■□□□□ 0.22
SKOR1P84550 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.4■□□□□ 0.22
SKOR1P84550 AC025678.2-201ENST00000562061 970 ntBASIC16.4■□□□□ 0.22
SKOR1P84550 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.4■□□□□ 0.22
SKOR1P84550 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.4■□□□□ 0.22
SKOR1P84550 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
SKOR1P84550 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.4■□□□□ 0.22
SKOR1P84550 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SKOR1P84550 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
SKOR1P84550 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC16.4■□□□□ 0.22
SKOR1P84550 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SKOR1P84550 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SKOR1P84550 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SKOR1P84550 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.4■□□□□ 0.22
SKOR1P84550 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SKOR1P84550 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SKOR1P84550 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SKOR1P84550 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SKOR1P84550 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
SKOR1P84550 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SKOR1P84550 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SKOR1P84550 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SKOR1P84550 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SKOR1P84550 AC126365.1-201ENST00000578585 1514 ntBASIC16.4■□□□□ 0.22
SKOR1P84550 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
SKOR1P84550 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SKOR1P84550 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SKOR1P84550 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SKOR1P84550 AC006504.5-208ENST00000588784 2401 ntBASIC16.39■□□□□ 0.21
SKOR1P84550 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SKOR1P84550 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SKOR1P84550 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.39■□□□□ 0.21
SKOR1P84550 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SKOR1P84550 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SKOR1P84550 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SKOR1P84550 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.39■□□□□ 0.21
SKOR1P84550 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
SKOR1P84550 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SKOR1P84550 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SKOR1P84550 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SKOR1P84550 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.39■□□□□ 0.21
SKOR1P84550 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.39■□□□□ 0.21
SKOR1P84550 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SKOR1P84550 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SKOR1P84550 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.39■□□□□ 0.21
SKOR1P84550 SPDYE14P-201ENST00000442619 822 ntBASIC16.39■□□□□ 0.21
SKOR1P84550 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.39■□□□□ 0.21
SKOR1P84550 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.39■□□□□ 0.21
SKOR1P84550 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SKOR1P84550 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC16.39■□□□□ 0.21
SKOR1P84550 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.39■□□□□ 0.21
SKOR1P84550 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.39■□□□□ 0.21
SKOR1P84550 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
SKOR1P84550 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.39■□□□□ 0.21
SKOR1P84550 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
SKOR1P84550 AC138761.1-201ENST00000584393 385 ntBASIC16.39■□□□□ 0.21
SKOR1P84550 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.39■□□□□ 0.21
SKOR1P84550 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.39■□□□□ 0.21
SKOR1P84550 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC16.39■□□□□ 0.21
SKOR1P84550 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SKOR1P84550 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SKOR1P84550 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC16.39■□□□□ 0.21
SKOR1P84550 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SKOR1P84550 AC011477.6-201ENST00000604980 1927 ntBASIC16.39■□□□□ 0.21
SKOR1P84550 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.39■□□□□ 0.21
SKOR1P84550 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
SKOR1P84550 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.38■□□□□ 0.21
SKOR1P84550 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SKOR1P84550 C1R-201ENST00000535233 2211 ntTSL 2 BASIC16.38■□□□□ 0.21
SKOR1P84550 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SKOR1P84550 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SKOR1P84550 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.38■□□□□ 0.21
SKOR1P84550 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SKOR1P84550 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SKOR1P84550 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.38■□□□□ 0.21
SKOR1P84550 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.38■□□□□ 0.21
SKOR1P84550 AC140479.7-201ENST00000636301 2332 ntBASIC16.38■□□□□ 0.21
SKOR1P84550 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SKOR1P84550 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SKOR1P84550 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.38■□□□□ 0.21
SKOR1P84550 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SKOR1P84550 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SKOR1P84550 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SKOR1P84550 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SKOR1P84550 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms