Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
AP3S2P59780 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
AP3S2P59780 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.41□□□□□ -0.26
AP3S2P59780 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.41□□□□□ -0.26
AP3S2P59780 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.41□□□□□ -0.26
AP3S2P59780 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
AP3S2P59780 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
AP3S2P59780 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
AP3S2P59780 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
AP3S2P59780 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
AP3S2P59780 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
AP3S2P59780 AC005521.1-201ENST00000393351 872 ntBASIC13.41□□□□□ -0.26
AP3S2P59780 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC13.41□□□□□ -0.26
AP3S2P59780 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
AP3S2P59780 ELK2BP-201ENST00000415014 1224 ntBASIC13.41□□□□□ -0.26
AP3S2P59780 AC022616.7-201ENST00000525383 220 ntBASIC13.41□□□□□ -0.26
AP3S2P59780 AC002347.1-201ENST00000569543 541 ntBASIC13.41□□□□□ -0.26
AP3S2P59780 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
AP3S2P59780 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.41□□□□□ -0.26
AP3S2P59780 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.41□□□□□ -0.26
AP3S2P59780 IL11-204ENST00000590625 1028 ntTSL 2 BASIC13.41□□□□□ -0.26
AP3S2P59780 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
AP3S2P59780 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
AP3S2P59780 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
AP3S2P59780 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
AP3S2P59780 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
AP3S2P59780 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
AP3S2P59780 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.41□□□□□ -0.26
AP3S2P59780 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.41□□□□□ -0.26
AP3S2P59780 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
AP3S2P59780 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.41□□□□□ -0.26
AP3S2P59780 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
AP3S2P59780 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.41□□□□□ -0.26
AP3S2P59780 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
AP3S2P59780 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
AP3S2P59780 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
AP3S2P59780 AC006504.4-201ENST00000592118 1568 ntBASIC13.41□□□□□ -0.26
AP3S2P59780 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
AP3S2P59780 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
AP3S2P59780 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
AP3S2P59780 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC13.4□□□□□ -0.26
AP3S2P59780 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
AP3S2P59780 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.4□□□□□ -0.26
AP3S2P59780 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
AP3S2P59780 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
AP3S2P59780 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.4□□□□□ -0.26
AP3S2P59780 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
AP3S2P59780 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.4□□□□□ -0.26
AP3S2P59780 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.4□□□□□ -0.26
AP3S2P59780 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
AP3S2P59780 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
AP3S2P59780 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
AP3S2P59780 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
AP3S2P59780 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
AP3S2P59780 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
AP3S2P59780 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
AP3S2P59780 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
AP3S2P59780 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.4□□□□□ -0.26
AP3S2P59780 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
AP3S2P59780 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.4□□□□□ -0.26
AP3S2P59780 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.4□□□□□ -0.26
AP3S2P59780 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.4□□□□□ -0.26
AP3S2P59780 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
AP3S2P59780 BET1L-206ENST00000486280 665 ntTSL 3 BASIC13.4□□□□□ -0.26
AP3S2P59780 RPS15P9-201ENST00000494093 319 ntBASIC13.4□□□□□ -0.26
AP3S2P59780 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.4□□□□□ -0.26
AP3S2P59780 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC13.4□□□□□ -0.26
AP3S2P59780 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC13.4□□□□□ -0.26
AP3S2P59780 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.4□□□□□ -0.26
AP3S2P59780 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC13.4□□□□□ -0.26
AP3S2P59780 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC13.4□□□□□ -0.26
AP3S2P59780 AC099336.1-202ENST00000602961 463 ntBASIC13.4□□□□□ -0.26
AP3S2P59780 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
AP3S2P59780 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
AP3S2P59780 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
AP3S2P59780 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
AP3S2P59780 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
AP3S2P59780 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.4□□□□□ -0.26
AP3S2P59780 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
AP3S2P59780 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.4□□□□□ -0.26
AP3S2P59780 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
AP3S2P59780 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
AP3S2P59780 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
AP3S2P59780 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
AP3S2P59780 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.4□□□□□ -0.26
AP3S2P59780 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
AP3S2P59780 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.27
AP3S2P59780 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
AP3S2P59780 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
AP3S2P59780 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S2P59780 PMS2P7-201ENST00000506558 1336 ntBASIC13.39□□□□□ -0.27
AP3S2P59780 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S2P59780 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S2P59780 STRCP1-201ENST00000509801 5328 ntBASIC13.39□□□□□ -0.27
AP3S2P59780 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
AP3S2P59780 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.39□□□□□ -0.27
AP3S2P59780 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S2P59780 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S2P59780 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S2P59780 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms